organellar chromatophore thylakoid lumen
The volume enclosed by an organellar chromatophore thylakoid membrane. [GO:0070117]
Synonyms: Paulinella-type chromatophore thylakoid lumen
Part of: organellar chromatophore thylakoid (GO:0070116)
Xrefs: uniprot.location:SL-0355 — Organellar chromatophore thylakoid lumen
Taxonomic distribution
NCBITaxon:39716Paulinella — VARIABLE: UniProt SL-0355 constrains organellar chromatophore thylakoid lumens to Paulinella species without asserting that every Paulinella species carries an organellar chromatophore. [uniprot.location:SL-0355— Organellar chromatophore thylakoid lumen]
Mechanism graphs
Organellar chromatophore thylakoid lumen topology (FUNCTION)
The organellar chromatophore thylakoid lumen is the Paulinella chromatophore thylakoid compartment enclosed by the thylakoid membrane.
| Subject | Predicate | Object | Evidence |
|---|---|---|---|
| organellar chromatophore thylakoid membrane | encloses | organellar chromatophore thylakoid lumen |
|
Discussions
- INTERPRETATION (RESOLVED): Keep the organellar chromatophore thylakoid membrane as the boundary of the organellar chromatophore thylakoid lumen rather than as a lumen component. GO:0070117 denotes the volume enclosed by an organellar chromatophore thylakoid membrane, whereas GO:0070118 denotes the lipid bilayer membrane that encloses that volume.
Evidence
GO:0070117Gene Ontology cellular-component term for the organellar chromatophore thylakoid lumen.GO:0031978Gene Ontology cellular-component term for plastid thylakoid lumen, the broader plastid thylakoid compartment.GO:0070116Gene Ontology cellular-component term for the organellar chromatophore thylakoid that this lumen is part of.GO:0070118Gene Ontology cellular-component term for the organellar chromatophore thylakoid membrane that encloses this lumen.uniprot.location:SL-0355— Organellar chromatophore thylakoid lumen UniProt Subcellular Location entry SL-0355 maps directly to GO:0070117, places it under plastid thylakoid lumen and organellar chromatophore thylakoid, and describes its Paulinella-specific taxonomic range.
Curation history
2026-09-12T19:25:00Zcodex · CREATED_RECORD — Scaffolded by scripts/new_record.py2026-09-12T19:25:28Zcodex · EXPANDED_RECORD — Added the GO synonym, plastid thylakoid-lumen parentage, organellar chromatophore thylakoid parthood, UniProt SL xref, Paulinella distribution, and a nonmechanistic thylakoid-lumen topology graph.2026-09-12T19:32:42Zcodex · ADDRESS_REVIEW — Resolved #696 by adding a resolved boundary interpretation that keeps the thylakoid membrane as a lumen boundary rather than a lumen component.
Source: data/structures/membrane_organelle/organellar_chromatophore_thylakoid_lumen.yaml