CellStructureMech

Membrane organelle

Lipid-bounded internal compartments — thylakoids, chlorosomes, magnetosomes.

214 records

Records
Label and definitionIdentifierCategoryKindStatus
acidocalcisome

An acidic electron-dense membrane-bounded organelle found in diverse microbes that stores polyphosphate, pyrophosphate, calcium and other cations and uses proton pumps and cation transporters to maintain its ion-rich matrix.

GO:0020022Membrane organelleMembrane bounded organelleProposed
acidocalcisome lumen

The acidocalcisome compartment bounded by the acidocalcisomal membrane.

GO:0033985Membrane organelleSubcellular regionProposed
acidocalcisome membrane

The lipid bilayer surrounding an acidocalcisome.

GO:0033102Membrane organelleMembraneProposed
actinophryid extrusome

A secretory granule beneath the cell or axopodial surface of actinophryid protists, containing amorphous electron-dense material released during prey capture.

cellstructuremech:actinophryid_extrusomeMembrane organelleMembrane bounded organelleProposed
anammoxosome

A ladderane-lipid-bounded intracytoplasmic organelle of anaerobic ammonium-oxidizing Planctomycetota that localizes the hydrazine-producing anammox catabolic pathway and its energy-conserving membrane reactions.

GO:0044222Membrane organelleMembrane bounded organelleProposed
anammoxosome membrane

The single ladderane-lipid-containing bilayer membrane that surrounds the anammoxosome.

cellstructuremech:anammoxosome_membraneMembrane organelleMembraneProposed
apicomplexan dense granule

Electron-dense organelle with a granular internal matrix found in a apicomplexan parasite; contains proteins destined to be secreted into the parasitophorous vacuole following parasite invasion of a host cell.

GO:0020026Membrane organelleMembrane bounded organelleProposed
apicomplexan dense granule membrane

The lipid bilayer surrounding a dense granule of the type found in apicomplexan parasites.

GO:0030668Membrane organelleMembraneProposed
apicoplast

The plastid organelle found in apicomplexans.

GO:0020011Membrane organelleMembrane bounded organelleProposed
apicoplast membrane

Any of the lipid bilayers that surround an apicoplast and form the apicoplast envelope.

GO:0160211Membrane organelleMembraneProposed
autophagosome

A double-membrane-bounded compartment that engulfs endogenous cellular material as well as invading microorganisms to target them to the lytic vacuole/lysosome for degradation as part of macroautophagy.

GO:0005776Membrane organelleMembrane bounded organelleProposed
autophagosome lumen

The volume enclosed within the autophagosome double-membrane.

GO:0034423Membrane organelleSubcellular regionProposed
autophagosome membrane

The membrane surrounding the autophagosome.

GO:0000421Membrane organelleMembraneProposed
bacterial thylakoid

A thylakoid that is derived from and attached to, but not necessarily continuous with, the plasma membrane, and is not enclosed in a plastid. It bears the photosynthetic pigments in photosynthetic cyanobacteria.

GO:0030075Membrane organelleOtherProposed
chitosome

An intracellular membrane-bounded particle found in fungi and containing chitin synthase; it synthesizes chitin microfibrils. Chitin synthase activity exists in chitosomes and they are proposed to act as a reservoir for regulated transport of chitin synthase enzymes to the division septum.

GO:0045009Membrane organelleMembrane bounded organelleProposed
chloroplast

A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

GO:0009507Membrane organelleMembrane bounded organelleProposed
chloroplast envelope

The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.

GO:0009941Membrane organelleMembraneProposed
chloroplast inner membrane

The inner, i.e. lumen-facing, lipid bilayer of the chloroplast envelope; also faces the chloroplast stroma.

GO:0009706Membrane organelleMembraneProposed
chloroplast intermembrane space

The region between the inner and outer lipid bilayers of a chloroplast envelope.

GO:0031972Membrane organelleSubcellular regionProposed
chloroplast membrane

Either of the lipid bilayers that surround a chloroplast and form the chloroplast envelope.

GO:0031969Membrane organelleMembraneProposed
chloroplast outer membrane

The cytoplasm-facing lipid bilayer of the chloroplast envelope.

GO:0009707Membrane organelleMembraneProposed
chloroplast stroma

The internal space enclosed by the chloroplast double membrane but excluding the thylakoid space.

GO:0009570Membrane organelleSubcellular regionProposed
chloroplast thylakoid

Sac-like membranous structures in a chloroplast combined into stacks, or grana, and present singly in the stroma as stroma thylakoids or frets that interconnect grana.

GO:0009534Membrane organelleOtherProposed
chloroplast thylakoid lumen

The volume enclosed by the membrane of a chloroplast thylakoid.

GO:0009543Membrane organelleSubcellular regionProposed
chloroplast thylakoid membrane

The pigmented membrane of a chloroplast thylakoid.

GO:0009535Membrane organelleMembraneProposed
chlorosome

A large light-harvesting antenna organelle of green photosynthetic bacteria in which bacteriochlorophyll aggregates self-assemble inside a lipid envelope and attach to the cytoplasmic membrane through a bacteriochlorophyll a-containing CsmA baseplate.

GO:0046858Membrane organelleOtherProposed
chlorosome envelope

The structure, composed of a monolayer of glycolipids with embedded proteins, that encloses the pigments and other contents of the chlorosome.

GO:0033105Membrane organelleOtherProposed
ciliary pocket membrane

That part of the plasma membrane found in the ciliary pocket (also called flagellar pocket).

GO:0020018Membrane organelleMembraneProposed
cis-Golgi network

The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum.

GO:0005801Membrane organelleMembrane bounded organelleProposed
cis-Golgi network membrane

The lipid bilayer surrounding any of the compartments that make up the cis-Golgi network.

GO:0033106Membrane organelleMembraneProposed
clathrin-coated endocytic vesicle

A clathrin-coated, membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance.

GO:0045334Membrane organelleMembrane bounded organelleProposed
clathrin-coated endocytic vesicle lumen

The volume enclosed by the membrane of a clathrin-coated endocytic vesicle.

GO:0106176Membrane organelleSubcellular regionProposed
clathrin-coated endocytic vesicle membrane

The lipid bilayer surrounding a clathrin-coated endocytic vesicle.

GO:0030669Membrane organelleMembraneProposed
clathrin-coated vesicle

A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes.

GO:0030136Membrane organelleMembrane bounded organelleProposed
clathrin-coated vesicle lumen

The clathrin-coated vesicle compartment bounded by the clathrin-coated vesicle membrane.

cellstructuremech:clathrin_coated_vesicle_lumenMembrane organelleSubcellular regionProposed
clathrin-coated vesicle membrane

The lipid bilayer surrounding a clathrin-coated vesicle.

GO:0030665Membrane organelleMembraneProposed
coated vesicle

Small membrane-bounded organelle formed by pinching off of a coated region of membrane. Some coats are made of clathrin, whereas others are made from other proteins.

GO:0030135Membrane organelleMembrane bounded organelleProposed
coated vesicle membrane

The lipid bilayer surrounding a coated vesicle.

GO:0030662Membrane organelleMembraneProposed
coccolith vesicle

A membrane-bounded intracellular compartment of coccolithophores that encloses a developing calcite coccolith. Its bounding membrane surrounds the site of coccolith mineralization and can change shape as the crystals grow.

cellstructuremech:coccolith_vesicleMembrane organelleMembrane bounded organelleProposed
contractile vacuolar membrane

The lipid bilayer surrounding the contractile vacuole.

GO:0031164Membrane organelleMembraneProposed
contractile vacuole

A specialized vacuole of eukaryotic cells, especially Protozoa, that fills with water from the cytoplasm and then discharges this externally by the opening of contractile vacuole pores. One of its functions is osmoregulatory.

GO:0000331Membrane organelleMembrane bounded organelleProposed
contractile vacuole complex

A non-membrane-bounded organelle of eukaryotic cells, especially Protozoa, that fills with water from the cytoplasm and then discharges this externally. One of its functions is osmoregulatory.

GO:0062159Membrane organelleOtherProposed
contractile vacuole lumen

The contractile vacuole compartment bounded by the contractile vacuole membrane.

cellstructuremech:contractile_vacuole_lumenMembrane organelleSubcellular regionProposed
contractile vacuole pore

Stable structure that regulates the flow of liquid between the contractile vacuole and the surrounding medium.

GO:0031913Membrane organelleMultiprotein complexProposed
COPI-coated vesicle

A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport.

GO:0030137Membrane organelleMembrane bounded organelleProposed
COPI-coated vesicle lumen

The COPI-coated vesicle compartment bounded by the COPI-coated vesicle membrane.

cellstructuremech:copi_coated_vesicle_lumenMembrane organelleSubcellular regionProposed
COPI-coated vesicle membrane

The lipid bilayer surrounding a COPI-coated vesicle.

GO:0030663Membrane organelleMembraneProposed
COPII-coated ER to Golgi transport vesicle

A vesicle with a coat formed of the COPII coat complex proteins. The COPII coat complex is formed by the Sec23p/Sec24p and the Sec13p/Sec31p heterodimers. COPII-associated vesicles transport proteins from the rough endoplasmic reticulum to the Golgi apparatus (anterograde transport).

GO:0030134Membrane organelleMembrane bounded organelleProposed
COPII-coated vesicle lumen

The COPII-coated vesicle compartment bounded by the COPII-coated vesicle membrane.

cellstructuremech:copii_coated_vesicle_lumenMembrane organelleSubcellular regionProposed
Cvt vesicle

A cytosolic vesicle that is enclosed by a double membrane and is implicated in the cytoplasm to vacuole targeting pathway. These vesicles are found in the yeast S. cerevisiae, and contain vacuolar hydrolases, aminopeptidase I (Ape1p) and alpha-mannosidase (Ams1p).

GO:0033107Membrane organelleMembrane bounded organelleProposed
Cvt vesicle lumen

The Cvt vesicle compartment bounded by the Cvt vesicle membrane.

cellstructuremech:cvt_vesicle_lumenMembrane organelleSubcellular regionProposed
Cvt vesicle membrane

Either lipid bilayer membrane surrounding a Cvt vesicle, a double membrane-layered vesicle implicated in the cytoplasm to vacuole targeting pathway.

GO:0033110Membrane organelleMembraneProposed
cyanelle

A plastid that contains unstacked, phycobilisome-bearing thylakoid membranes and is surrounded by a double membrane with a peptidoglycan layer in the intermembrane space between the two envelope membranes. Cyanelles are characteristic of algae in the class Glaucophyta, and may represent an ancestral form of plastid.

GO:0009842Membrane organelleMembrane bounded organelleProposed
cyanelle envelope

The double lipid bilayer enclosing the cyanelle and separating its contents from the rest of the cytoplasm; includes the intermembrane space.

GO:0033112Membrane organelleMembraneProposed
cyanelle inner membrane

The inner, i.e. lumen-facing, lipid bilayer of the cyanelle envelope; also faces the cyanelle stroma.

GO:0036012Membrane organelleMembraneProposed
cyanelle intermembrane space

The region between the inner and outer lipid bilayers of the cyanelle envelope; includes the peptidoglycan layer.

GO:0036014Membrane organelleSubcellular regionProposed
cyanelle membrane

Either of the lipid bilayers that surround a cyanelle and form the cyanelle envelope.

GO:0033113Membrane organelleMembraneProposed
cyanelle outer membrane

The outer, i.e. cytoplasm-facing, lipid bilayer of the cyanelle envelope.

GO:0036013Membrane organelleMembraneProposed
cyanelle stroma

The space enclosed by the double membrane of a cyanelle.

GO:0034060Membrane organelleSubcellular regionProposed
cyanelle thylakoid

A thylakoid found in a cyanelle, which is a type of plastid found in certain algae. The cyanelle contains a photosynthetic membrane resembling that of cyanobacteria.

GO:0009843Membrane organelleMembrane bounded organelleProposed
cyanelle thylakoid lumen

The cyanelle compartment bounded by the thylakoid membranes.

GO:0033114Membrane organelleSubcellular regionProposed
cyanelle thylakoid membrane

The lipid bilayer membrane of any thylakoid within a cyanelle, a photosynthetic organelle of glaucocystophyte algae.

GO:0033115Membrane organelleMembraneProposed
cytoplasmic vesicle

A vesicle found in the cytoplasm of a cell.

GO:0031410Membrane organelleMembrane bounded organelleProposed
cytoplasmic vesicle lumen

The volume enclosed by a cytoplasmic vesicle.

GO:0060205Membrane organelleSubcellular regionProposed
cytoplasmic vesicle membrane

The lipid bilayer surrounding a cytoplasmic vesicle.

GO:0030659Membrane organelleMembraneProposed
diazoplast

An obligate, membrane-bounded nitrogen-fixing compartment of Epithemia diatoms containing a reduced, nonphotosynthetic cyanobacterial endosymbiont; a metabolically integrated proto-organelle whose genetic integration remains unresolved.

cellstructuremech:diazoplastMembrane organelleMembrane bounded organelleProposed
early endosome

A membrane-bounded organelle that receives incoming material from primary endocytic vesicles that have been generated by clathrin-dependent and clathrin-independent endocytosis; vesicles fuse with the early endosome to deliver cargo for sorting into recycling or degradation pathways.

GO:0005769Membrane organelleMembrane bounded organelleProposed
early endosome lumen

The volume enclosed by the membrane of an early endosome.

GO:0031905Membrane organelleSubcellular regionProposed
early endosome membrane

The lipid bilayer surrounding an early endosome.

GO:0031901Membrane organelleMembraneProposed
endocytic vesicle

A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance. Endocytic vesicles fuse with early endosomes to deliver the cargo for further sorting.

GO:0030139Membrane organelleMembrane bounded organelleProposed
endocytic vesicle lumen

The volume enclosed by the membrane of an endocytic vesicle.

GO:0071682Membrane organelleSubcellular regionProposed
endocytic vesicle membrane

The lipid bilayer surrounding an endocytic vesicle.

GO:0030666Membrane organelleMembraneProposed
endoplasmic reticulum

The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).

GO:0005783Membrane organelleMembrane bounded organelleProposed
endoplasmic reticulum lumen

The volume enclosed by the membranes of the endoplasmic reticulum.

GO:0005788Membrane organelleSubcellular regionProposed
endoplasmic reticulum membrane

The lipid bilayer surrounding the endoplasmic reticulum.

GO:0005789Membrane organelleMembraneProposed
endosome

A vacuole to which materials ingested by endocytosis are delivered.

GO:0005768Membrane organelleMembrane bounded organelleProposed
endosome lumen

The volume enclosed by the membrane of an endosome.

GO:0031904Membrane organelleSubcellular regionProposed
endosome membrane

The lipid bilayer surrounding an endosome.

GO:0010008Membrane organelleMembraneProposed
epiplastidial membrane

The outermost lipid bilayer surrounding complex plastids in organisms that acquired their plastids through secondary endosymbiosis. This membrane is derived from the host cell's endomembrane system and is continuous with the rough endoplasmic reticulum and the outer nuclear envelope. In some species, the cytoplasmic face may be studded with ribosomes.

GO:7770040Membrane organelleMembraneProposed
ER to Golgi transport vesicle membrane

The lipid bilayer surrounding a vesicle transporting substances from the endoplasmic reticulum to the Golgi apparatus.

GO:0012507Membrane organelleMembraneProposed
esterosome

A vesicle filled with crystalline protein that shows sequence similarities with various esterases.

GO:0033117Membrane organelleMembrane bounded organelleProposed
esterosome lumen

The volume enclosed by the esterosome membrane.

GO:0034467Membrane organelleSubcellular regionProposed
esterosome membrane

The lipid bilayer surrounding an esterosome.

GO:0033118Membrane organelleMembraneProposed
exoneme

A dense granule-like organelle of the apical complex of merozoites, released into the parasitophorous vacuole, mediating protease-dependent rupture and parasite exit from the infected erythrocyte.

GO:0044311Membrane organelleMembrane bounded organelleProposed
eyespot apparatus

A small pigmented organelle used in single-celled organisms to detect light.

GO:1990413Membrane organelleOtherProposed
ferrosome

A bacterial lipid-bounded iron-storage organelle that contains iron-, phosphorus- and oxygen-rich material and forms through Fez protein-dependent machinery.

cellstructuremech:ferrosomeMembrane organelleMembrane bounded organelleProposed
flagellar pocket

Invagination of the plasma membrane from which a flagellum protrudes.

GO:0020016Membrane organelleSubcellular regionProposed
food vacuole

A vacuole within a parasite used for digestion of the host cell cytoplasm.

GO:0020020Membrane organelleMembrane bounded organelleProposed
fungal-type vacuole

A vacuole that has both lytic and storage functions. The fungal vacuole is a large, membrane-bounded organelle that functions as a reservoir for small molecules and as the primary compartment for degradation.

GO:0000324Membrane organelleMembrane bounded organelleProposed
fungal-type vacuole lumen

The volume enclosed within the vacuolar membrane of the fungal-type vacuole.

GO:0000328Membrane organelleSubcellular regionProposed
fungal-type vacuole membrane

The lipid bilayer surrounding the fungal-type vacuole.

GO:0000329Membrane organelleMembraneProposed
glycosome

A membrane-bounded organelle found in organisms from the order Kinetoplastida that houses the enzymes of glycolysis.

GO:0020015Membrane organelleMembrane bounded organelleProposed
glycosome lumen

The volume enclosed by the glycosome membrane.

GO:0034468Membrane organelleSubcellular regionProposed
glycosome membrane

The membrane surrounding the glycosome.

GO:0046860Membrane organelleMembraneProposed
glyoxysomal lumen

The volume enclosed by the glyoxysome membrane.

GO:0031908Membrane organelleSubcellular regionProposed
glyoxysomal membrane

The membrane surrounding the glyoxysome.

GO:0046861Membrane organelleMembraneProposed
glyoxysome

A specialized form of peroxisome that contains the enzymes of the glyoxylate pathway. The glyoxysome is found in some plant cells, notably the cells of germinating seeds.

GO:0009514Membrane organelleMembrane bounded organelleProposed
Golgi apparatus

A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways.

GO:0005794Membrane organelleMembrane bounded organelleProposed
Golgi-associated vesicle

Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell.

GO:0005798Membrane organelleMembrane bounded organelleProposed
Golgi-associated vesicle membrane

The lipid bilayer surrounding a vesicle associated with the Golgi apparatus.

GO:0030660Membrane organelleMembraneProposed
Golgi cisterna

Any of the thin, flattened membrane-bounded compartments that form the central portion of the Golgi complex.

GO:0031985Membrane organelleMembrane bounded organelleProposed
Golgi cisterna membrane

The lipid bilayer surrounding any of the thin, flattened compartments that form the central portion of the Golgi complex.

GO:0032580Membrane organelleMembraneProposed
Golgi lumen

The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks.

GO:0005796Membrane organelleSubcellular regionProposed
Golgi membrane

The lipid bilayer surrounding any of the compartments of the Golgi apparatus.

GO:0000139Membrane organelleMembraneProposed
hydrogenosomal membrane

The lipid bilayer surrounding a hydrogenosome.

GO:0046859Membrane organelleMembraneProposed
hydrogenosome

A spherical, membrane-bounded organelle found in some anaerobic protozoa, which participates in ATP and molecular hydrogen formation.

GO:0042566Membrane organelleMembrane bounded organelleProposed
hydrogenosome lumen

The volume enclosed by the hydrogenosome membrane.

GO:0034492Membrane organelleSubcellular regionProposed
inner membrane pellicle complex

An apicomplexan double-membrane pellicle structure formed by flattened vesicles beneath the plasma membrane.

GO:0070258Membrane organelleMembrane bounded organelleProposed
intramitochondrial protein quality control compartment

A mitochondrial membrane-enclosed deposit compartment characterized in budding yeast that sequesters aggregated matrix proteins, often near the nucleus and separated from the remaining tubular mitochondrial network.

cellstructuremech:intramitochondrial_protein_quality_control_compartmentMembrane organelleMembrane bounded organelleProposed
late endosome

A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center.

GO:0005770Membrane organelleMembrane bounded organelleProposed
late endosome lumen

The volume enclosed by the membrane of a late endosome.

GO:0031906Membrane organelleSubcellular regionProposed
late endosome membrane

The lipid bilayer surrounding a late endosome.

GO:0031902Membrane organelleMembraneProposed
macronucleus

A membrane-bounded organelle of ciliated protozoan cells that contains polyploid copies of a portion of the cell's complete genome. Transcription of genes occurs in macronuclei. Some ciliate species may contain multiple macronuclei per cell.

GO:0031039Membrane organelleMembrane bounded organelleProposed
magnetosome

A membrane-bounded organelle of magnetotactic bacteria enclosing a nanocrystal of a magnetic iron mineral — magnetite (Fe3O4) or greigite (Fe3S4). Magnetosomes are invaginations of the cytoplasmic membrane that are filled with iron, and are arranged into a chain along a cytoskeletal filament so that the cell behaves as a swimming compass needle.

GO:0110143Membrane organelleMembrane bounded organelleProposed
magnetosome lumen

The volume enclosed by the magnetosome membrane.

GO:0110145Membrane organelleSubcellular regionProposed
magnetosome membrane

The lipid bilayer membrane surrounding a magnetosome.

GO:0110146Membrane organelleMembraneProposed
Maurer's cleft

A disk-like structure that appears at the periphery of a red blood cell infected by an apicomplexan parasite, characterized by a translucent lumen and an electron-dense coat of variable thickness; often appears to be tethered to the host cell membrane by fibrous connections with the erythrocyte cytoskeleton.

GO:0020036Membrane organelleMembrane bounded organelleProposed
methane-oxidizing organelle

A cytoplasmic, membrane-bounded organelle in aerobic methanotrophic bacteria, built from intracytoplasmic membranes that house particulate methane monooxygenase and associated electron-transfer proteins for methane catabolism.

GO:0044227Membrane organelleMembrane bounded organelleProposed
microneme

A small, elongated secretory organelle that forms part of the apical complex, located along the main axis of an apicomplexan parasite cell within the extreme apical region and at the periphery under the inner membrane complex. Of the specialized secretory compartments identified in apicomplexans, micronemes discharge their contents first, during initial contact of the parasite's apical pole with the host cell surface. Micronemal proteins function during parasite attachment and penetration into the target cell.

GO:0020009Membrane organelleMembrane bounded organelleProposed
microneme lumen

The volume enclosed by the microneme membrane.

GO:0034494Membrane organelleSubcellular regionProposed
microneme membrane

The lipid bilayer surrounding a microneme.

GO:0033163Membrane organelleMembraneProposed
micronucleus

A membrane-bounded organelle of ciliated protozoan cells that contains a diploid copy of the cell's complete genome. Sections of contiguous sequence in the macronucleus are often interrupted by internal eliminated sequences (IES), and may be permuted, in micronuclei. Genic transcription is not found in micronuclei. Some ciliate species may contain multiple micronuclei per cell.

GO:0031040Membrane organelleMembrane bounded organelleProposed
microsporidian posterior vacuole

A membrane-bounded posterior vesicle in a microsporidian spore that expands during germination and is implicated in polar-tube extrusion and sporoplasm expulsion.

cellstructuremech:microsporidian_posterior_vacuoleMembrane organelleMembrane bounded organelleProposed
mitochondrial crista

Any of the inward folds of the mitochondrial inner membrane. Their number, extent, and shape differ in mitochondria from different tissues and organisms. They appear to be devices for increasing the surface area of the mitochondrial inner membrane, where the enzymes of electron transport and oxidative phosphorylation are found. Their shape can vary with the respiratory state of the mitochondria.

GO:0030061Membrane organelleMembraneProposed
mitochondrial crista junction

A tubular structure of relatively uniform size that connects a mitochondrial crista to the mitochondrial inner boundary membrane.

GO:0044284Membrane organelleSubcellular regionProposed
mitochondrial-derived compartment

An inducible compartment characterized in budding yeast that remodels the outer mitochondrial membrane into multilamellar domains, selectively concentrates membrane-associated proteins, and can enclose cytosolic material.

cellstructuremech:mitochondrial_derived_compartmentMembrane organelleMembrane bounded organelleProposed
mitochondrial envelope

The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space.

GO:0005740Membrane organelleMembraneProposed
mitochondrial inner boundary membrane

The portion of the mitochondrial inner membrane that is not invaginated to form cristae and lies parallel to the outer membrane.

GO:0097002Membrane organelleMembraneProposed
mitochondrial inner membrane

The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.

GO:0005743Membrane organelleMembraneProposed
mitochondrial intermembrane space

The region between the inner and outer lipid bilayers of the mitochondrial envelope.

GO:0005758Membrane organelleSubcellular regionProposed
mitochondrial matrix

The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.

GO:0005759Membrane organelleSubcellular regionProposed
mitochondrial membrane

Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope.

GO:0031966Membrane organelleMembraneProposed
mitochondrial outer membrane

The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope.

GO:0005741Membrane organelleMembraneProposed
mitochondrion

A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

GO:0005739Membrane organelleMembrane bounded organelleProposed
mitosome

A double-membrane-bounded organelle that functions in iron-sulfur protein maturation; evolutionarily derived from mitochondria. The mitosome has been detected only in anaerobic or microaerophilic organisms that do not have mitochondria, such as Entamoeba histolytica, Giardia intestinalis and several species of Microsporidia. These organisms are not capable of gaining energy from oxidative phosphorylation, which is normally performed by mitochondria.

GO:0032047Membrane organelleMembrane bounded organelleProposed
mitosome envelope

The mitosomal envelope comprises the inner and outer mitosomal membrane including the intermembrane space.

cellstructuremech:mitosome_envelopeMembrane organelleMembraneProposed
mitosome inner membrane

The inner membrane of a mitosome is the membrane which separates the mitosomal matrix from the intermembrane space.

cellstructuremech:mitosome_inner_membraneMembrane organelleMembraneProposed
mitosome intermembrane space

The mitosomal intermembrane space is the space between inner and outer mitosomal membranes.

cellstructuremech:mitosome_intermembrane_spaceMembrane organelleSubcellular regionProposed
mitosome matrix

The matrix of a mitosome is the mitosomal internal spaces enclosed by the inner membrane.

cellstructuremech:mitosome_matrixMembrane organelleSubcellular regionProposed
mitosome outer membrane

The outer membrane of a mitosome is the mitosomal membrane facing the cytoplasm.

cellstructuremech:mitosome_outer_membraneMembrane organelleMembraneProposed
mononeme

A small, threadlike secretory organelle that forms part of the apical complex and lies close to the subpellicular microtubules.

GO:0070074Membrane organelleMembrane bounded organelleProposed
mucocyst

A small subcellular vesicle, surrounded by a membrane, in the pellicle of ciliate protozoans that discharges a mucus-like secretion.

GO:0036000Membrane organelleMembrane bounded organelleProposed
multivesicular body

A type of endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm.

GO:0005771Membrane organelleMembrane bounded organelleProposed
multivesicular body intraluminal vesicle

A membrane-bounded vesicle inside a multivesicular body that forms when the limiting endosomal membrane buds inward and pinches into the lumen during multivesicular body sorting.

cellstructuremech:multivesicular_body_intraluminal_vesicleMembrane organelleMembrane bounded organelleProposed
multivesicular body lumen

The multivesicular body compartment bounded by the multivesicular body membrane.

cellstructuremech:multivesicular_body_lumenMembrane organelleSubcellular regionProposed
multivesicular body membrane

The lipid bilayer surrounding a multivesicular body.

GO:0032585Membrane organelleMembraneProposed
nitroplast

A membrane-bounded nitrogen-fixing organelle derived from a UCYN-A cyanobacterium within a Braarudosphaera haptophyte; characterized in B. bigelowii by coordinated division and evidence for host-encoded protein import.

cellstructuremech:nitroplastMembrane organelleMembrane bounded organelleProposed
nuclear envelope

The double lipid bilayer that encloses the nucleus, separating its contents from the cytoplasm. It consists of an inner and outer nuclear membrane, with an intermembrane space (20-40 nm wide, also called the perinuclear space) between them. The envelope is supported by the nuclear lamina and contains nuclear pore complexes, which regulate molecular transport.

GO:0005635Membrane organelleMembraneProposed
nuclear envelope lumen

The region between the two lipid bilayers of the nuclear envelope.

GO:0005641Membrane organelleSubcellular regionProposed
nuclear inner membrane

The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope.

GO:0005637Membrane organelleMembraneProposed
nuclear lumen

The volume enclosed by the nuclear inner membrane.

GO:0031981Membrane organelleSubcellular regionProposed
nuclear net

A reticulating double-membrane network characterized inside the nucleus of the dinoflagellate Polykrikos kofoidii. Its strands interconnect dinomitotic tunnels and the peripheral nuclear envelope, with regularly spaced swellings along the inner strands; the network is continuous with and forms part of the nuclear envelope.

cellstructuremech:nuclear_netMembrane organelleMembraneProposed
nuclear outer membrane

The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope.

GO:0005640Membrane organelleMembraneProposed
nucleomorph

A small, vestigial nucleus found in some plastids that derive from a eukaryotic endosymbiont. Observed in chlorarachniophytes and cryptomonads, which acquired their plastids from a green and red alga respectively.

GO:0033009Membrane organelleMembrane bounded organelleProposed
nucleus

A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing.

GO:0005634Membrane organelleMembrane bounded organelleProposed
organellar chromatophore

A bacteroid-containing symbiosome in which the bacterial component is a genetically highly reduced cyanobacterium that is photosynthetically active

GO:0070111Membrane organelleMembrane bounded organelleProposed
organellar chromatophore inner membrane

The inner, i.e. lumen-facing, of the two lipid bilayers surrounding an organellar chromatophore.

GO:0070113Membrane organelleMembraneProposed
organellar chromatophore intermembrane space

The region between the inner and outer lipid bilayers that surround an organellar chromatophore.

GO:0070115Membrane organelleSubcellular regionProposed
organellar chromatophore membrane

Either of the lipid bilayers that surround an organellar chromatophore.

GO:0070112Membrane organelleMembraneProposed
organellar chromatophore outer membrane

The outer, i.e. cytoplasm-facing, of the two lipid bilayers surrounding an organellar chromatophore.

GO:0070114Membrane organelleMembraneProposed
organellar chromatophore thylakoid

A thylakoid located in an organellar chromatophore

GO:0070116Membrane organelleMembrane bounded organelleProposed
organellar chromatophore thylakoid lumen

The volume enclosed by an organellar chromatophore thylakoid membrane.

GO:0070117Membrane organelleSubcellular regionProposed
organellar chromatophore thylakoid membrane

The lipid bilayer membrane of any thylakoid within an organellar chromatophore.

GO:0070118Membrane organelleMembraneProposed
osmiophilic body

A membrane-bounded vesicle found predominantly in Plasmodium female gametocytes, that becomes progressively more abundant as the gametocyte reaches full maturity. These vesicles lie beneath the subpellicular membrane of the gametocyte, and the release of their contents into the parasitophorous vacuole has been postulated to aid in the escape of gametocytes from the erythrocyte after ingestion by the mosquito.

GO:0044310Membrane organelleMembrane bounded organelleProposed
parasitophorous vacuole

A membrane-bounded host-cell vacuole in which an invading apicomplexan parasite resides and develops; its bounding parasitophorous vacuolar membrane is initiated during host-cell invasion and surrounds the intracellular parasite.

cellstructuremech:parasitophorous_vacuoleMembrane organelleMembrane bounded organelleProposed
parasitophorous vacuole lumen

The parasitophorous vacuole compartment bounded by the membrane of the parasitophorous vacuole.

cellstructuremech:parasitophorous_vacuole_lumenMembrane organelleSubcellular regionProposed
parasitophorous vacuole membrane

The membrane surrounding the parasitophorous vacuole.

cellstructuremech:parasitophorous_vacuole_membraneMembrane organelleMembraneProposed
periplastidial membrane

The lipid bilayer that forms the second outermost membrane of complex plastids in organisms that acquired their plastids through secondary endosymbiosis. The periplastidial membrane is evolutionarily derived from the plasma membrane of the engulfed algal endosymbiont and together with the outer envelope membrane of the plastid defines the periplastidial compartment.

GO:7770041Membrane organelleMembraneProposed
peroxisomal matrix

The volume contained within the membranes of a peroxisome; in many cells the matrix contains a crystalloid core largely composed of urate oxidase.

GO:0005782Membrane organelleSubcellular regionProposed
peroxisomal membrane

The lipid bilayer surrounding a peroxisome.

GO:0005778Membrane organelleMembraneProposed
peroxisome

A small organelle enclosed by a single membrane, and found in most eukaryotic cells; it contains peroxidases and other enzymes involved in metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.

GO:0005777Membrane organelleMembrane bounded organelleProposed
phagocytic vesicle

A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis.

GO:0045335Membrane organelleMembrane bounded organelleProposed
phagocytic vesicle lumen

The volume enclosed by a phagocytic vesicle membrane.

GO:0097013Membrane organelleSubcellular regionProposed
phagocytic vesicle membrane

The lipid bilayer surrounding a phagocytic vesicle.

GO:0030670Membrane organelleMembraneProposed
photosynthetic membrane

A membrane enriched in complexes formed of reaction centers, accessory pigments and electron carriers, in which photosynthetic reactions take place.

GO:0034357Membrane organelleMembraneProposed
plasma membrane-derived chromatophore membrane

The lipid bilayer associated with a plasma membrane-derived chromatophore; surrounds chromatophores that form complete vesicles.

GO:0042717Membrane organelleMembraneProposed
plasma membrane-derived thylakoid lumen

The internal lumen enclosed by a plasma membrane-derived bacterial thylakoid.

GO:0031979Membrane organelleSubcellular regionProposed
plasma membrane-derived thylakoid membrane

The pigmented membrane of a plasma membrane-derived thylakoid.

GO:0031676Membrane organelleMembraneProposed
plastid

Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.

GO:0009536Membrane organelleMembrane bounded organelleProposed
plastid envelope

The double lipid bilayer enclosing a plastid and separating its contents from the rest of the cytoplasm; includes the intermembrane space.

GO:0009526Membrane organelleMembraneProposed
plastid inner membrane

The inner, i.e. lumen-facing, lipid bilayer of the plastid envelope; also faces the plastid stroma.

GO:0009528Membrane organelleMembraneProposed
plastid intermembrane space

The region between the inner and outer lipid bilayers of the plastid envelope.

GO:0009529Membrane organelleSubcellular regionProposed
plastid membrane

Any lipid bilayer that surrounds a plastid or is part of the plastid envelope. Primary plastids (in plants, green algae, red algae, and glaucophytes) are surrounded by two membranes; complex plastids derived from secondary endosymbiosis are surrounded by three or four membranes.

GO:0042170Membrane organelleMembraneProposed
plastid outer membrane

The outer, i.e. cytoplasm-facing, lipid bilayer of the plastid envelope.

GO:0009527Membrane organelleMembraneProposed
plastid stroma

The ground substance of a plastid.

GO:0009532Membrane organelleSubcellular regionProposed
plastid thylakoid

Any thylakoid within a plastid.

GO:0031976Membrane organelleOtherProposed
plastid thylakoid lumen

The volume enclosed by a plastid thylakoid membrane.

GO:0031978Membrane organelleSubcellular regionProposed
plastid thylakoid membrane

The lipid bilayer membrane of any thylakoid within a plastid.

GO:0055035Membrane organelleMembraneProposed
polaroplast

A membrane-bounded organelle found in a microsporidian spore that swells with water and exerts pressure to rupture the polar cap and evert the polar tube.

GO:0160201Membrane organelleMembrane bounded organelleProposed
pusule

A dinoflagellate membrane organelle connected to a flagellar canal, comprising sacs, tubules or collecting chambers with associated diverticula. Its wall includes an invaginated plasma membrane apposed to vacuolar membrane; the canal-connected lumen is not a sealed intracellular compartment.

cellstructuremech:pusuleMembrane organelleMembrane bounded organelleProposed
pyrenoid tubule

A specialized membranous structure that extends from the photosynthetic thylakoid membrane into and transverses the matrix of a pyrenoid.

GO:0160223Membrane organelleMembraneProposed
recycling endosome

An organelle consisting of a network of tubules that functions in targeting molecules, such as receptors transporters and lipids, to the plasma membrane.

GO:0055037Membrane organelleMembrane bounded organelleProposed
recycling endosome lumen

The volume enclosed by the membranes of a recycling endosome.

GO:0034777Membrane organelleSubcellular regionProposed
recycling endosome membrane

The lipid bilayer surrounding a recycling endosome.

GO:0055038Membrane organelleMembraneProposed
reservosome

A posterior, membrane-bounded endocytic organelle in Trypanosoma cruzi epimastigotes that receives internalized macromolecular cargo.

cellstructuremech:reservosomeMembrane organelleMembrane bounded organelleProposed
reservosome lumen

The volume enclosed by the membranes of a reservosome.

GO:0106124Membrane organelleSubcellular regionProposed
reservosome matrix

A matrix composed of planar membranes, vesicles and lipid inclusions within the reservosome.

GO:0106125Membrane organelleSubcellular regionProposed
rhoptry

A large, club-shaped secretory organelle that forms part of the apical complex of an apicomplexan parasite, and consists of a bulbous body and a narrow electron-dense neck that extends through the conoid at the apical tip of the parasite. The rhoptry necks serve as ducts through which the contents of the rhoptries are secreted after attachment to the host has been completed and at the commencement of invasion. Rhoptry proteins function in the biogenesis and host organellar association of the parasitophorous vacuole.

GO:0020008Membrane organelleMembrane bounded organelleProposed
rhoptry lumen

The volume enclosed by the rhoptry membrane.

GO:0034591Membrane organelleSubcellular regionProposed
rhoptry membrane

The lipid bilayer surrounding a rhoptry.

GO:0033016Membrane organelleMembraneProposed
rhoptry neck

Narrow, electron-dense part of the rhoptry that extends through the conoid at the apical tip of an apicomplexan parasite.

GO:1990225Membrane organelleOtherProposed
scintillon

A cytoplasmic light-emitting compartment of certain dinoflagellates that produces bioluminescence upon acidification in the presence of oxygen.

GO:0036007Membrane organelleMembrane bounded organelleProposed
spongiome

A network of tubules and vesicles that is part of a contractile vacuole complex and participates in external water discharge during osmoregulation.

GO:0062160Membrane organelleMembrane bounded organelleProposed
thylakoid

A membranous cellular structure that bears the photosynthetic pigments in photosynthetic bacteria and within chloroplasts.

GO:0009579Membrane organelleOtherProposed
thylakoid membrane

The pigmented photosynthetic membrane of cyanobacteria and chloroplasts, enriched in photosystems, cytochrome b6f, ATP synthase, plastoquinone and glycolipids, where light-driven electron transport builds the proton motive force for photosynthetic ATP synthesis.

GO:0042651Membrane organelleMembraneProposed
toxicyst

A ciliate offensive extrusome that stores toxic discharge material and ejects on prey contact to immobilize prey during raptorial feeding.

cellstructuremech:toxicystMembrane organelleMembrane bounded organelleProposed
trans-Golgi network

The network of interconnected tubular and cisternal structures located within the Golgi apparatus on the side distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination.

GO:0005802Membrane organelleMembrane bounded organelleProposed
trans-Golgi network membrane

The lipid bilayer surrounding any of the compartments that make up the trans-Golgi network.

GO:0032588Membrane organelleMembraneProposed
trans-Golgi network transport vesicle membrane

The lipid bilayer surrounding a vesicle transporting substances between the trans-Golgi network and other parts of the cell.

GO:0012510Membrane organelleMembraneProposed
trichocyst

A crystalline exocytotic organelle composed of small, acidic proteins existing primarily as disulphide-linked dimers. The trichocyst releases long filamentous proteins that capture predators in net-like structures to slow them down when the cell is disturbed.

GO:0055039Membrane organelleMembrane bounded organelleProposed
vacuolar lumen

The volume enclosed within the vacuolar membrane.

GO:0005775Membrane organelleSubcellular regionProposed
vacuolar membrane

The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell.

GO:0005774Membrane organelleMembraneProposed
vacuole

A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material.

GO:0005773Membrane organelleMembrane bounded organelleProposed
Woronin body

A peroxisome-derived dense-core vesicle of filamentous fungi that seals septal pores upon hyphal wounding.

GO:0140266Membrane organelleMembrane bounded organelleProposed