clathrin-coated endocytic vesicle lumen
The volume enclosed by the membrane of a clathrin-coated endocytic vesicle. [GO:0106176]
Part of: clathrin-coated endocytic vesicle (GO:0045334)
Taxonomic distribution
NCBITaxon:4932Saccharomyces cerevisiae — COMMON: Budding yeast forms clathrin-dependent endocytic vesicles at cortical actin-based endocytic sites. [DOI:10.1016/j.devcel.2005.04.014]
Canonical examples
NCBITaxon:4932Saccharomyces cerevisiae — Budding-yeast endocytic-site model in which clathrin and adaptor protein dynamics mark clathrin-coated vesicle formation. [DOI:10.1016/j.devcel.2005.04.014]
Mechanism graphs
Clathrin-coated endocytic vesicle lumen topology (FUNCTION)
The clathrin-coated endocytic vesicle membrane bounds the clathrin-coated endocytic vesicle lumen inside the endocytic coated vesicle.
| Subject | Predicate | Object | Evidence |
|---|---|---|---|
| clathrin-coated endocytic vesicle lumen | is part of | clathrin-coated endocytic vesicle |
|
| clathrin-coated endocytic vesicle membrane | bounds | clathrin-coated endocytic vesicle lumen |
|
Discussions
- INTERPRETATION (RESOLVED): Link GO:0106176 under the generic clathrin-coated vesicle lumen as well as the GO endocytic vesicle lumen. GO:0106176 names the lumen inside the clathrin-coated endocytic vesicle, GO:0045334 is a subtype of GO:0030136 clathrin-coated vesicle, and this corpus already has a generic cellstructuremech:clathrin_coated_vesicle_lumen parent for lumen records in clathrin-coated vesicles.
- INTERPRETATION (RESOLVED): Keep internalized cargo out of the clathrin-coated endocytic vesicle lumen record. GO:0106176 denotes the bounded lumen rather than a stable cargo cohort, and clathrin-coated endocytic vesicles carry cargo that varies by endocytic event.
Evidence
GO:0106176Gene Ontology cellular-component term for the clathrin-coated endocytic vesicle lumen.GO:0071682Gene Ontology cellular-component parent term for endocytic vesicle lumens.GO:0045334Gene Ontology cellular-component term for the whole clathrin-coated endocytic vesicle.GO:0030136Gene Ontology cellular-component term for the broader clathrin-coated vesicle class.GO:0030669Gene Ontology cellular-component term for the clathrin-coated endocytic vesicle membrane that bounds the lumen.DOI:10.1016/j.devcel.2005.04.014Newpher et al. 2005, In Vivo Dynamics of Clathrin and Its Adaptor-Dependent Recruitment to the Actin-Based Endocytic Machinery in Yeast, Developmental Cell.
Curation history
2026-09-16T09:20:58Zcodex · CREATED_RECORD — Scaffolded by scripts/new_record.py2026-09-16T09:21:38Zcodex · EXPANDED_RECORD — Added GO endocytic-vesicle-lumen parentage, whole-vesicle parthood, Saccharomyces endocytic-site scope, GO/DOI evidence, a nonmechanistic lumen topology graph, and a resolved cargo-boundary discussion.2026-09-16T09:33:26Zcodex · ADDRESSED_PR_REVIEW — Resolved issue #1083 by adding the local generic clathrin-coated-vesicle lumen parentage and supporting GO:0030136 evidence.
Source: data/structures/membrane_organelle/clathrin_coated_endocytic_vesicle_lumen.yaml