agricultural soil

ENVO:00002259 ·resolve ·TERRESTRIAL ·EXACT SEEDED

Soil which is part of an ecosystem used for agricultural activities. — ENVO

Machine-generated and unreviewed. Its grounding comes from the seeder's rules, not from a curator.

Source attestations

Each upstream vocabulary's own account of this habitat. Assertion counts are per-source units and are not comparable across sources — GOLD counts organisms, BacDive strains, PREGO taxa.

What each upstream vocabulary says about this habitat
Source	Label / path	Assertions	Unit
ENVIRONMENTS_TABLE	soil_agricultural Physicochemical parameter bands from kg-microbe's environment table.	—
GOLD	Environmental > Terrestrial > Soil > Loam > Agricultural soil	77	ORGANISM
MADIN	agricultural soil	117	TAXON
PREGO	agricultural soil	1767	TAXON

Broader habitats

soil ENVO:00001998
loam ENVO:00002258

Environmental parameters

Physicochemical parameters
Parameter	Value	Source
GRADIENTS	high	kg-microbe environments.csv (soil_agricultural)
NUTRIENTS	medium	kg-microbe environments.csv (soil_agricultural)
ORGANIC_MATTER	medium	kg-microbe environments.csv (soil_agricultural)
PRESSURE	low	kg-microbe environments.csv (soil_agricultural)
SALINITY	low	kg-microbe environments.csv (soil_agricultural)
SALINITY_VARIABILITY	small	kg-microbe environments.csv (soil_agricultural)
STRUCTURAL_COMPLEXITY	high	kg-microbe environments.csv (soil_agricultural)
TEMPERATURE_VARIABILITY	high	kg-microbe environments.csv (soil_agricultural)
WATER_AVAILABILITY	medium	kg-microbe environments.csv (soil_agricultural)
WATER_VARIABILITY	occasionally dry	kg-microbe environments.csv (soil_agricultural)

Associated taxa

Taxa reported from this habitat, which is weaker than being characteristic of it. rank is out of pool: a high rank in a pool of thousands of near-tied scores is a weak claim. Entries corroborated by a second, independent source are listed first.

Taxa reported from this habitat
Taxon	Source	Rank	Pool	Corroborated
actinomyces_griseus `NCBITaxon:1911`	MADIN	—	117	PREGO
Pseudomonas fluorescens Pf0-1 `NCBITaxon:205922`	MADIN	—	117	PREGO
Candidatus Solibacter usitatus Ellin6076 `NCBITaxon:234267`	MADIN	—	117	PREGO
Burkholderia thailandensis E264 `NCBITaxon:271848`	MADIN	—	117	PREGO
Methanocella paludicola SANAE `NCBITaxon:304371`	MADIN	—	117	PREGO
Burkholderia cenocepacia HI2424 `NCBITaxon:331272`	MADIN	—	117	PREGO
Burkholderia cenocepacia MC0-3 `NCBITaxon:406425`	MADIN	—	117	PREGO
Acinetobacter oleivorans DR1 `NCBITaxon:436717`	MADIN	—	117	PREGO
Streptosporangium roseum DSM 43021 `NCBITaxon:479432`	MADIN	—	117	PREGO
Cellvibrio japonicus Ueda107 `NCBITaxon:498211`	MADIN	—	117	PREGO
Bacillus thuringiensis sv. pulsiensis BGSC 4CC1 `NCBITaxon:527028`	MADIN	—	117	PREGO
Candidatus Liberibacter solanacearum CLso-ZC1 `NCBITaxon:658172`	MADIN	—	117	PREGO
Paludibacter propionicigenes WB4 `NCBITaxon:694427`	MADIN	—	117	PREGO
Sinorhizobium meliloti BL225C `NCBITaxon:698936`	MADIN	—	117	PREGO
Allobosea thiooxidans `NCBITaxon:53254`	PREGO	1	1767
Geodermatophilus obscurus DSM 43160 `NCBITaxon:526225`	PREGO	2	1767
Gemmatimonas aurantiaca T-27 `NCBITaxon:379066`	PREGO	3	1767
Gemmata sp. Wa1-1 `NCBITaxon:235140`	PREGO	4	1767
Intrasporangium calvum DSM 43043 `NCBITaxon:710696`	PREGO	5	1767
Conexibacter woesei DSM 14684 `NCBITaxon:469383`	PREGO	6	1767
Bradyrhizobium diazoefficiens USDA 110 `NCBITaxon:224911`	PREGO	7	1767
Sorangium cellulosum So ce56 `NCBITaxon:448385`	PREGO	8	1767
Polaromonas sp. JS666 `NCBITaxon:296591`	PREGO	9	1767
Sorangium cellulosum `NCBITaxon:56`	PREGO	10	1767
Nakamurella multipartita DSM 44233 `NCBITaxon:479431`	PREGO	11	1767

Showing 25 of 50 kept associations.

Also called

agricultural soils — PREGO

Curation

What a curator decided about this record, and why. A record built from several source concepts can carry one decision per concept.

REVIEW 2026-08-13 · claude-opus-5
Reviewed and endorsed the seeder's own resolution. Multi-source review pass: this record is attested by more than one independent vocabulary, and this source's label or path was read against the record's ontology term to check the merge is right. It agrees. Source concepts in the same pass whose labels did not agree were re-decided rather than endorsed; see the pass's other decisions of the same date. (source concept habitatmech:GOLD.842c30e44d)
REVIEW 2026-08-13 · claude-opus-5
Reviewed and endorsed the seeder's own resolution. Multi-source review pass: this record is attested by more than one independent vocabulary, and this source's label or path was read against the record's ontology term to check the merge is right. It agrees. Source concepts in the same pass whose labels did not agree were re-decided rather than endorsed; see the pass's other decisions of the same date. (source concept habitatmech:PREGO.d61ebbc0a8)

Provenance

Generated by scripts/seed_from_sources.py from the committed inventories in data/raw/. View the record.