HabitatMech

compost

ENVO:00002170 ·resolve ·ENGINEERED ·EXACT REVIEWED

Manure which has been derived from the aerobically decomposed remnants of organic materials. — ENVO

Source attestations

Each upstream vocabulary's own account of this habitat. Assertion counts are per-source units and are not comparable across sources — GOLD counts organisms, BacDive strains, PREGO taxa.

What each upstream vocabulary says about this habitat
SourceLabel / pathAssertionsUnit
ENVIRONMENTS_TABLE compost
Physicochemical parameter bands from kg-microbe's environment table.
GOLD Engineered > Solid waste > Composting
3 GOLD ecosystem node ids share this path; first shown. See data/raw/gold_ecosystem_paths.tsv.
270 ORGANISM
GOLD Engineered > Solid waste > Composting > Oil palm
2 GOLD ecosystem node ids share this path; first shown. See data/raw/gold_ecosystem_paths.tsv.
1 ORGANISM
MADIN compost 112 TAXON
PREGO compost 1913 TAXON

Broader habitats

Environmental parameters

Physicochemical parameters
ParameterValueSource
GRADIENTShighkg-microbe environments.csv (compost)
NUTRIENTShighkg-microbe environments.csv (compost)
ORGANIC_MATTERhighkg-microbe environments.csv (compost)
PHlowkg-microbe environments.csv (compost)
PRESSURElowkg-microbe environments.csv (compost)
SALINITYlowkg-microbe environments.csv (compost)
SALINITY_VARIABILITYsmallkg-microbe environments.csv (compost)
STRUCTURAL_COMPLEXITYmediumkg-microbe environments.csv (compost)
TEMPERATURE_VARIABILITYmediumkg-microbe environments.csv (compost)
WATER_AVAILABILITYmediumkg-microbe environments.csv (compost)
WATER_VARIABILITYoccasionally drykg-microbe environments.csv (compost)

Associated taxa

Taxa reported from this habitat, which is weaker than being characteristic of it. rank is out of pool: a high rank in a pool of thousands of near-tied scores is a weak claim. Entries corroborated by a second, independent source are listed first.

Taxa reported from this habitat
TaxonSourceRankPoolCorroborated
Rhodovibrio salinarum DSM 9154 NCBITaxon:1089552 PREGO 3 1913 MADIN
Thermocrispum municipale DSM 44069 NCBITaxon:1111737 PREGO 4 1913 MADIN
Thermocrispum agreste DSM 44070 NCBITaxon:1111738 PREGO 5 1913 MADIN
Arenimonas composti TR7-09 = DSM 18010 NCBITaxon:1121013 PREGO 6 1913 MADIN
Comamonas composti DSM 21721 NCBITaxon:1121349 PREGO 7 1913 MADIN
Demetria terragena DSM 11295 NCBITaxon:1121385 PREGO 8 1913 MADIN
Desulfitobacterium chlororespirans DSM 11544 NCBITaxon:1121395 PREGO 9 1913 MADIN
Gordonia hirsuta DSM 44140 = NBRC 16056 NCBITaxon:1121927 PREGO 11 1913 MADIN
Humibacter albus DSM 18994 NCBITaxon:1121952 PREGO 12 1913 MADIN
Microbacterium luticocti DSM 19459 NCBITaxon:1122239 PREGO 13 1913 MADIN
Phenylobacterium composti DSM 19425 NCBITaxon:1122958 PREGO 14 1913 MADIN
Tuberibacillus calidus DSM 17572 NCBITaxon:1123405 PREGO 16 1913 MADIN
Stutzerimonas azotifigens DSM 17556 NCBITaxon:1292027 PREGO 17 1913 MADIN
Olivibacter domesticus NCBITaxon:407022 PREGO 20 1913 MADIN
Thermomonospora curvata DSM 43183 NCBITaxon:471852 PREGO 21 1913 MADIN
Thermosporothrix hazakensis NCBITaxon:644383 PREGO 22 1913 MADIN
Leadbetterella byssophila DSM 17132 NCBITaxon:649349 PREGO 23 1913 MADIN
Bacillus pumilus NCBITaxon:1408 MADIN 112 PREGO
cellulomonas_uda NCBITaxon:1714 MADIN 112 PREGO
Thermobifida fusca YX NCBITaxon:269800 MADIN 112 PREGO
Pseudomonas aeruginosa NCBITaxon:287 MADIN 112 PREGO
Symbiobacterium thermophilum IAM 14863 NCBITaxon:292459 MADIN 112 PREGO
burkholderia_sp NCBITaxon:36773 MADIN 112 PREGO
Ruminiclostridium cellulolyticum H10 NCBITaxon:394503 MADIN 112 PREGO
Pseudoxanthomonas suwonensis 11-1 NCBITaxon:743721 MADIN 112 PREGO

Showing 25 of 33 kept associations.

Also called

Curation

What a curator decided about this record, and why. A record built from several source concepts can carry one decision per concept.

  1. GROUND 2026-08-13 · claude-opus-5

    Grounded to ENVO:00002170 'compost' (CLOSE). GOLD names the composting process, ENVO the resulting material; close but not exact. Path: Engineered > Solid waste > Composting (source concept habitatmech:GOLD.4741a9f8bb)

  2. GROUND 2026-08-13 · claude-opus-5

    Grounded to ENVO:00002170 'compost' (CLOSE). GOLD names the composting process, ENVO the resulting material; close but not exact. Path: Engineered > Solid waste > Composting > Oil palm (source concept habitatmech:GOLD.981cf7502c)

  3. REVIEW 2026-08-13 · claude-opus-5

    Reviewed and endorsed the seeder's own resolution. Multi-source review pass: this record is attested by more than one independent vocabulary, and this source's label or path was read against the record's ontology term to check the merge is right. It agrees. Source concepts in the same pass whose labels did not agree were re-decided rather than endorsed; see the pass's other decisions of the same date. (source concept habitatmech:PREGO.e2f1a69477)

  4. REVIEW 2026-08-15 · claude-opus-5

    Reviewed and endorsed the seeder's own resolution. Co-attestor review (#12): this source names the ontology CURIE itself, so its grounding is definitional rather than a lexical guess — the record IS the term the source pointed at. Recorded so the record it co-attests can reach REVIEWED, which needs every source concept decided. (source concept habitatmech:MADIN.87d709b6aa)

Provenance

Generated by scripts/seed_from_sources.py from the committed inventories in data/raw/. View the record.