HabitatMech

Contaminant

habitatmech:BACDIVE.4d06ff4bb5 ·OTHER ·NOT_APPLICABLE REVIEWED

Source attestations

Each upstream vocabulary's own account of this habitat. Assertion counts are per-source units and are not comparable across sources — GOLD counts organisms, BacDive strains, PREGO taxa.

What each upstream vocabulary says about this habitat
SourceLabel / pathAssertionsUnit
BACDIVE Contaminant
kg-microbe's isolation-source mapping table has a row for this source with no ontology target; treated as ungrounded rather than re-grounded by lexical match.		 61 STRAIN

Associated taxa

Taxa reported from this habitat, which is weaker than being characteristic of it. rank is out of pool: a high rank in a pool of thousands of near-tied scores is a weak claim. Entries corroborated by a second, independent source are listed first.

Taxa reported from this habitat
TaxonSourceRankPoolCorroborated
Brevibacillus brevis NCBITaxon:1393 BACDIVE 1 54
Bacillus licheniformis NCBITaxon:1402 BACDIVE 2 54
Brevibacillus laterosporus NCBITaxon:1465 BACDIVE 3 54
Sphingomonas sp. NCBITaxon:28214 BACDIVE 4 54
Pseudomonas sp. NCBITaxon:306 BACDIVE 5 54
Stenotrophomonas maltophilia NCBITaxon:40324 BACDIVE 6 54
uncultured Bacillus sp. NCBITaxon:83428 BACDIVE 7 54
Herminiimonas contaminans NCBITaxon:1111140 BACDIVE 8 54
Sphingomonas echinoides ATCC 14820 NCBITaxon:1112212 BACDIVE 9 54
Cutibacterium granulosum DSM 20700 NCBITaxon:1160719 BACDIVE 10 54
Cupriavidus metallidurans NCBITaxon:119219 BACDIVE 11 54
Rhodococcoides corynebacterioides NBRC 14404 NCBITaxon:1219012 BACDIVE 12 54
Pseudoxanthomonas mexicana NCBITaxon:128785 BACDIVE 13 54
Lysinibacillus contaminans NCBITaxon:1293441 BACDIVE 14 54
Streptococcus pyogenes NCBITaxon:1314 BACDIVE 15 54
Bacillus cereus NCBITaxon:1396 BACDIVE 16 54
Bacillus pumilus NCBITaxon:1408 BACDIVE 17 54
Lactiplantibacillus paraplantarum DSM 10667 NCBITaxon:1423789 BACDIVE 18 54
Bacillus thuringiensis NCBITaxon:1428 BACDIVE 19 54
Halomonas sp. NCBITaxon:1486246 BACDIVE 20 54
Clostridium tyrobutyricum NCBITaxon:1519 BACDIVE 21 54
Leifsonia xyli NCBITaxon:1575 BACDIVE 22 54
Paenibacillus sp. DSM 6358 NCBITaxon:171399 BACDIVE 23 54
Corynebacterium sp. NCBITaxon:1720 BACDIVE 24 54
Rhodococcus ruber NCBITaxon:1830 BACDIVE 25 54

Curation

What a curator decided about this record, and why. A record built from several source concepts can carry one decision per concept.

  1. NOT_APPLICABLE 2026-08-21 · codex-gpt-5

    Marked NOT_APPLICABLE: the source concept does not denote a habitat. Non-habitat screen review (#108): BacDive's flat label is Contaminant, a role or classification of an isolate or substance rather than a place or material the microbe inhabited. The external screen matched an external chemical term, but CHEBI is not in the committed slice, so the evidence is recorded here rather than asserted as an unverifiable xref. (source concept habitatmech:BACDIVE.4d06ff4bb5)

Provenance

Generated by scripts/seed_from_sources.py from the committed inventories in data/raw/. View the record.