HabitatMech

Contamination

habitatmech:BACDIVE.0c0740efd8 ·OTHER ·UNGROUNDED REVIEWED

Source attestations

Each upstream vocabulary's own account of this habitat. Assertion counts are per-source units and are not comparable across sources — GOLD counts organisms, BacDive strains, PREGO taxa.

What each upstream vocabulary says about this habitat
SourceLabel / pathAssertionsUnit
BACDIVE Contamination 474 STRAIN

Associated taxa

Taxa reported from this habitat, which is weaker than being characteristic of it. rank is out of pool: a high rank in a pool of thousands of near-tied scores is a weak claim. Entries corroborated by a second, independent source are listed first.

Taxa reported from this habitat
TaxonSourceRankPoolCorroborated
Janibacter terrae NCBITaxon:103817 BACDIVE 1 398
Anaeromyxobacter dehalogenans NCBITaxon:161493 BACDIVE 2 398
Arthrobacter sp. NCBITaxon:1667 BACDIVE 3 398
Mycolicibacterium gilvum NCBITaxon:1804 BACDIVE 4 398
Sphingomonas sp. NCBITaxon:28214 BACDIVE 5 398
Rhodococcus opacus NCBITaxon:37919 BACDIVE 6 398
Leifsonia aquatica NCBITaxon:144185 BACDIVE 7 398
Rhodococcus ruber NCBITaxon:1830 BACDIVE 8 398
Pseudomonas sp. NCBITaxon:306 BACDIVE 9 398
Lysinibacillus macroides NCBITaxon:33935 BACDIVE 10 398
uncultured Bacillus sp. NCBITaxon:83428 BACDIVE 11 398
Stutzerimonas kunmingensis NCBITaxon:1211807 BACDIVE 12 398
uncultured Rhodococcus sp. NCBITaxon:194249 BACDIVE 13 398
Pseudomonas fluorescens NCBITaxon:294 BACDIVE 14 398
Corynebacterium tuberculostearicum NCBITaxon:38304 BACDIVE 15 398
Mycolicibacterium frederiksbergense NCBITaxon:117567 BACDIVE 16 398
Sphingobium yanoikuyae NCBITaxon:13690 BACDIVE 17 398
Bacillus licheniformis NCBITaxon:1402 BACDIVE 18 398
Cutibacterium acnes NCBITaxon:1747 BACDIVE 19 398
Rhodococcoides fascians NCBITaxon:1828 BACDIVE 20 398
bacterium NCBITaxon:1869227 BACDIVE 21 398
Afipia sp. NCBITaxon:1871052 BACDIVE 22 398
Acidovorax sp. NCBITaxon:1872122 BACDIVE 23 398
Aquabacterium sp. NCBITaxon:1872578 BACDIVE 24 398
Bacteria NCBITaxon:2 BACDIVE 25 398

Related terms

Terms a source linked to this concept without this record claiming to be one of them, or to be narrower than one. A cross-reference, not a grounding.

Curation

What a curator decided about this record, and why. A record built from several source concepts can carry one decision per concept.

  1. CONFIRM_UNGROUNDED 2026-08-16 · claude-opus-5

    Confirmed UNGROUNDED: no ontology term fits this concept. ENVO:00002204 'anthropogenic contamination feature' kept as an xref. Risky-grounding review (#12): the seeder made ENVO:00002204 'anthropogenic contamination feature' the identity of BacDive's 'Contamination' category — the highest-volume risky grounding at 474 strains. The term asserts two things BacDive does not: that the contamination is anthropogenic, and that the thing is a geographic feature with elevated contaminants in its materials. BacDive's category says only that a strain was isolated as a contaminant, which is as often of a product, a culture or a cleanroom as of a place. These are different concepts rather than a broader and a narrower one, so the term is not a parent either — parent_habitats asserts the parent is BROADER. Kept as an xref (#99), which records that upstream saw a connection without this repo asserting one. (source concept habitatmech:BACDIVE.0c0740efd8)

Provenance

Generated by scripts/seed_from_sources.py from the committed inventories in data/raw/. View the record.