Each upstream vocabulary's own account of this habitat. Assertion
counts are per-source units and are not comparable across sources —
GOLD counts organisms, BacDive strains, PREGO taxa.
What each upstream vocabulary says about this habitat
Source
Label / path
Assertions
Unit
BACDIVE
Patient kg-microbe's isolation-source mapping table has a row for this source with no ontology target; treated as ungrounded rather than re-grounded by lexical match.
7992
STRAIN
Associated taxa
Taxa reported from this habitat, which is weaker than being
characteristic of it. rank is out of pool: a high rank in a
pool of thousands of near-tied scores is a weak claim. Entries corroborated by a
second, independent source are listed first.
Taxa reported from this habitat
Taxon
Source
Rank
Pool
Corroborated
Escherichia coliNCBITaxon:562
BACDIVE
1
1536
Pseudomonas aeruginosaNCBITaxon:287
BACDIVE
2
1536
Klebsiella pneumoniaeNCBITaxon:573
BACDIVE
3
1536
[Haemophilus] ducreyiNCBITaxon:730
BACDIVE
4
1536
Staphylococcus aureusNCBITaxon:1280
BACDIVE
5
1536
Streptococcus pneumoniaeNCBITaxon:1313
BACDIVE
6
1536
Streptococcus anginosusNCBITaxon:1328
BACDIVE
7
1536
Capnocytophaga canimorsusNCBITaxon:28188
BACDIVE
8
1536
Haemophilus influenzaeNCBITaxon:727
BACDIVE
9
1536
Gardnerella vaginalisNCBITaxon:2702
BACDIVE
10
1536
BacteriaNCBITaxon:2
BACDIVE
11
1536
Bordetella pertussisNCBITaxon:520
BACDIVE
12
1536
Granulicatella adiacensNCBITaxon:46124
BACDIVE
13
1536
Lacticaseibacillus rhamnosusNCBITaxon:47715
BACDIVE
14
1536
Stenotrophomonas maltophiliaNCBITaxon:40324
BACDIVE
15
1536
Actinotignum schaaliiNCBITaxon:59505
BACDIVE
16
1536
Enterococcus faeciumNCBITaxon:1352
BACDIVE
17
1536
Salmonella entericaNCBITaxon:28901
BACDIVE
18
1536
Aggregatibacter aphrophilusNCBITaxon:732
BACDIVE
19
1536
Burkholderia cenocepaciaNCBITaxon:95486
BACDIVE
20
1536
Schaalia odontolyticaNCBITaxon:1660
BACDIVE
21
1536
Burkholderia multivoransNCBITaxon:87883
BACDIVE
22
1536
Lactobacillus gasseriNCBITaxon:1596
BACDIVE
23
1536
Corynebacterium sp.NCBITaxon:1720
BACDIVE
24
1536
Campylobacter jejuniNCBITaxon:197
BACDIVE
25
1536
Curation
What a curator decided about this record, and why. A record built
from several source concepts can carry one decision per concept.
NOT_APPLICABLE2026-08-12 · claude-opus-5
Marked NOT_APPLICABLE: the source concept does not denote a habitat. Patient names the person a strain came from, not the habitat it lived in. The habitat is the body site, which BacDive records separately. (source concept habitatmech:BACDIVE.b8fea19ee8)
Provenance
Generated by scripts/seed_from_sources.py from the committed
inventories in data/raw/.
View the record.