Tree

habitatmech:BACDIVE.3192a0f47e ·OTHER ·UNGROUNDED REVIEWED

Source attestations

Each upstream vocabulary's own account of this habitat. Assertion counts are per-source units and are not comparable across sources — GOLD counts organisms, BacDive strains, PREGO taxa.

What each upstream vocabulary says about this habitat
Source	Label / path	Assertions	Unit
BACDIVE	Tree kg-microbe's isolation-source mapping table has a row for this source with no ontology target; treated as ungrounded rather than re-grounded by lexical match.	872	STRAIN

Broader habitats

plant-associated environment ENVO:01001001

Associated taxa

Taxa reported from this habitat, which is weaker than being characteristic of it. rank is out of pool: a high rank in a pool of thousands of near-tied scores is a weak claim. Entries corroborated by a second, independent source are listed first.

Taxa reported from this habitat
Taxon	Source	Rank	Pool
Sorangium cellulosum `NCBITaxon:56`	BACDIVE	1	481
Corallococcus coralloides `NCBITaxon:184914`	BACDIVE	2	481
Myxococcus fulvus `NCBITaxon:33`	BACDIVE	3	481
Nannocystis exedens `NCBITaxon:54`	BACDIVE	4	481
Pseudomonas syringae `NCBITaxon:317`	BACDIVE	5	481
Archangium sp. `NCBITaxon:1872627`	BACDIVE	6	481
Herpetosiphon sp. `NCBITaxon:71864`	BACDIVE	7	481
Xanthomonas campestris `NCBITaxon:339`	BACDIVE	8	481
Sporocytophaga myxococcoides `NCBITaxon:153721`	BACDIVE	9	481
Pseudomonas sp. `NCBITaxon:306`	BACDIVE	10	481
Agrobacterium radiobacter `NCBITaxon:362`	BACDIVE	11	481
Melittangium lichenicola `NCBITaxon:45`	BACDIVE	12	481
Corallococcus exiguus `NCBITaxon:83462`	BACDIVE	13	481
Myxococcales `NCBITaxon:29`	BACDIVE	14	481
Myxococcus xanthus `NCBITaxon:34`	BACDIVE	15	481
`NCBITaxon:57`	BACDIVE	16	481
Myxococcus virescens `NCBITaxon:83456`	BACDIVE	17	481
Bacteria `NCBITaxon:2`	BACDIVE	18	481
Erwinia pyrifoliae `NCBITaxon:79967`	BACDIVE	19	481
Myxococcus stipitatus `NCBITaxon:83455`	BACDIVE	20	481
Allostigmatella erecta `NCBITaxon:83460`	BACDIVE	21	481
Lonsdalea populi `NCBITaxon:1172565`	BACDIVE	22	481
Streptomyces sp. `NCBITaxon:1931`	BACDIVE	23	481
Cystobacter sp. `NCBITaxon:1965334`	BACDIVE	24	481
Cystobacter armeniaca `NCBITaxon:394090`	BACDIVE	25	481

Curation

What a curator decided about this record, and why. A record built from several source concepts can carry one decision per concept.

CONFIRM_UNGROUNDED 2026-08-12 · claude-opus-5
Confirmed UNGROUNDED: no ontology term fits this concept. Nearest broader term ENVO:01001001 'plant-associated environment' attached as a parent. A tree as host. No tree-associated environment term exists; BTO:0005516 wood is the material, not the living host. Parented to plant-associated environment as the nearest broader term. ENVO term request. (source concept habitatmech:BACDIVE.3192a0f47e)

Provenance

Generated by scripts/seed_from_sources.py from the committed inventories in data/raw/. View the record.