HabitatMech

Well biofilm

habitatmech:GOLD.1f74489d04 ·AQUATIC ·UNGROUNDED SEEDED

SEEDED workflow status. The source-seeding rules supplied this record; consult its curation history for later attributed changes. This status does not establish human review.

Source attestations

Each upstream vocabulary's own account of this habitat. Assertion counts are per-source units and are not comparable across sources — GOLD counts organisms, BacDive strains, PREGO taxa.

What each upstream vocabulary says about this habitat
SourceLabel / pathAssertionsUnit
GOLD Environmental > Aquatic > Deep subsurface > Groundwater > Well biofilm —

Curation

What a curator decided about this record, and why. A record built from several source concepts can carry one decision per concept.

  1. CONFIRM_UNGROUNDED 2026-08-12 · claude-opus-5 · class-level sweep, not an individual judgement

    Confirmed UNGROUNDED: no ontology term fits this concept. Class-level sweep (see docs/HARMONIZATION.md#class-level-sweep): no term in the vendored slice matched this label by any search route. Whether the concept is a habitat at all was NOT assessed, so this is not yet a term-request candidate. (source concept habitatmech:GOLD.1f74489d04)

  2. SOURCE_PARENT_EXCLUDED 2026-10-06 · codex-gpt-5

    Excluded GOLD source-path parent contribution habitatmech:GOLD.22a80cbd14 for habitatmech:GOLD.1f74489d04 (Environmental > Aquatic > Deep subsurface > Groundwater > Well biofilm). ITEM hierarchy assessment (#1592): official ENVO a2455d1a77e46bb8a664d65a157166b539269042 distinguishes biofilm ENVO:00002034, a microbial aggregation with an adhesive matrix, from groundwater ENVO:01001004. A well-associated biofilm is not a kind of the surrounding water. Exclude only this GOLD context parent; preserve the qualified mint, GOLD5960, full path, absent count/unit/predicate and UNGROUNDED/CLASS/SEEDED provenance. A supported biofilm genus and definition need separate item-level curation; do not infer casing, fracture, depth or experimental scope.

Provenance

Generated by scripts/seed_from_sources.py from the committed inventories in data/raw/. View the record.