deep marine sediment

ENVO:00002113 ·resolve ·AQUATIC ·EXACT SEEDED

Sediment that accumulates in the flat or very gently sloping areas of the deep ocean basin floor. The three main types of deep marine sediment, also known as pelagic sediment, are siliceous oozes, calcareous oozes, and red clays. — ENVO

Machine-generated and unreviewed. Its grounding comes from the seeder's rules, not from a curator.

Source attestations

Each upstream vocabulary's own account of this habitat. Assertion counts are per-source units and are not comparable across sources — GOLD counts organisms, BacDive strains, PREGO taxa.

What each upstream vocabulary says about this habitat
Source	Label / path	Assertions	Unit
ENVIRONMENTS_TABLE	sediment_marine_deep Physicochemical parameter bands from kg-microbe's environment table.	—
MADIN	deep marine sediment	19	TAXON
PREGO	deep marine sediment	2065	TAXON

Broader habitats

marine sediment ENVO:03000033

Environmental parameters

Physicochemical parameters
Parameter	Value	Source
GRADIENTS	high	kg-microbe environments.csv (sediment_marine_deep)
PH	high	kg-microbe environments.csv (sediment_marine_deep)
PRESSURE	high	kg-microbe environments.csv (sediment_marine_deep)
SALINITY	high	kg-microbe environments.csv (sediment_marine_deep)
SALINITY_VARIABILITY	small	kg-microbe environments.csv (sediment_marine_deep)
STRUCTURAL_COMPLEXITY	medium	kg-microbe environments.csv (sediment_marine_deep)
TEMPERATURE	low	kg-microbe environments.csv (sediment_marine_deep)
TEMPERATURE_VARIABILITY	low	kg-microbe environments.csv (sediment_marine_deep)
WATER_AVAILABILITY	high	kg-microbe environments.csv (sediment_marine_deep)
WATER_VARIABILITY	permanently wet	kg-microbe environments.csv (sediment_marine_deep)

Associated taxa

Taxa reported from this habitat, which is weaker than being characteristic of it. rank is out of pool: a high rank in a pool of thousands of near-tied scores is a weak claim. Entries corroborated by a second, independent source are listed first.

Taxa reported from this habitat
Taxon	Source	Rank	Pool	Corroborated
Pseudoalteromonas sp. SM9913 `NCBITaxon:234831`	MADIN	—	19	PREGO
microbulbifer_thermotolerans `NCBITaxon:252514`	MADIN	—	19	PREGO
Thermosediminibacter oceani DSM 16646 `NCBITaxon:555079`	MADIN	—	19	PREGO
Marinoscillum furvescens `NCBITaxon:1026`	PREGO	1	2065
Rhodobacter capsulatus `NCBITaxon:1061`	PREGO	2	2065
Tenacibaculum maritimum `NCBITaxon:107401`	PREGO	3	2065
Magnetospirillum fulvum `NCBITaxon:1082`	PREGO	4	2065
Rhodospirillum rubrum `NCBITaxon:1085`	PREGO	5	2065
Rhodothalassium salexigens `NCBITaxon:1086`	PREGO	6	2065
Rhodovibrio salinarum `NCBITaxon:1087`	PREGO	7	2065
Thiothrix fructosivorans `NCBITaxon:111770`	PREGO	8	2065
Ignatzschineria larvae `NCBITaxon:112009`	PREGO	9	2065
Seinonella peptonophila `NCBITaxon:112248`	PREGO	10	2065
Marinomonas mediterranea `NCBITaxon:119864`	PREGO	11	2065
Nitrosococcus oceani `NCBITaxon:1229`	PREGO	12	2065
Piscirickettsia salmonis `NCBITaxon:1238`	PREGO	13	2065
Ruminococcus flavefaciens `NCBITaxon:1265`	PREGO	14	2065
Alkalilimnicola `NCBITaxon:133193`	PREGO	15	2065
Bacillus sp. (in: firmicutes) `NCBITaxon:1409`	PREGO	16	2065
Clostridium `NCBITaxon:1485`	PREGO	17	2065
Paraclostridium sordellii `NCBITaxon:1505`	PREGO	18	2065
Metabacillus litoralis `NCBITaxon:152268`	PREGO	19	2065
Desulforegula conservatrix `NCBITaxon:153026`	PREGO	20	2065
Romboutsia lituseburensis `NCBITaxon:1537`	PREGO	21	2065
`NCBITaxon:158080`	PREGO	22	2065

Showing 25 of 44 kept associations.

Also called

deep marine sediments — ENVO
marine sediment — PREGO
marine sediments — PREGO
pelagic sediment {alternative name} — ENVO
pelagic sediment {alternative name} — PREGO

Provenance

Generated by scripts/seed_from_sources.py from the committed inventories in data/raw/. View the record.