HabitatMech

leaf

PO:0025034 ·resolve ·HOST_ASSOCIATED ·EXACT SEEDED

A phyllome (PO:0006001) that is not associated with a reproductive structure. — PO

Machine-generated and unreviewed. Its grounding comes from the seeder's rules, not from a curator.

Source attestations

Each upstream vocabulary's own account of this habitat. Assertion counts are per-source units and are not comparable across sources — GOLD counts organisms, BacDive strains, PREGO taxa.

What each upstream vocabulary says about this habitat
SourceLabel / pathAssertionsUnit
BACDIVE Leaf-Phyllosphere
kg-microbe's isolation-source mapping table has a row for this source with no ontology target; treated as ungrounded rather than re-grounded by lexical match.
500 STRAIN
ENVIRONMENTS_TABLE host_plant_leaf-associated
Physicochemical parameter bands from kg-microbe's environment table.
GOLD Host-associated > Plants > Phyllosphere > Phylloplane/Leaf surface
2 GOLD ecosystem node ids share this path; first shown. See data/raw/gold_ecosystem_paths.tsv.
843 ORGANISM
GOLD Host-associated > Plants > Phyllosphere > Phylloplane/Leaf
2 GOLD ecosystem node ids share this path; first shown. See data/raw/gold_ecosystem_paths.tsv.
1448 ORGANISM
MADIN leaf 77 TAXON

Broader habitats

Environmental parameters

Physicochemical parameters
ParameterValueSource
GRADIENTShighkg-microbe environments.csv (host_plant_leaf-associated)
PHmediumkg-microbe environments.csv (host_plant_leaf-associated)
PRESSURElowkg-microbe environments.csv (host_plant_leaf-associated)
SALINITY_VARIABILITYsmallkg-microbe environments.csv (host_plant_leaf-associated)
TEMPERATURE_VARIABILITYhighkg-microbe environments.csv (host_plant_leaf-associated)

Associated taxa

Taxa reported from this habitat, which is weaker than being characteristic of it. rank is out of pool: a high rank in a pool of thousands of near-tied scores is a weak claim. Entries corroborated by a second, independent source are listed first.

Taxa reported from this habitat
TaxonSourceRankPoolCorroborated
Methylobacterium sp. NCBITaxon:409 BACDIVE 1 231
Sphingomonas sp. NCBITaxon:28214 BACDIVE 2 231
Rhizobium sp. NCBITaxon:391 BACDIVE 3 231
Corallococcus coralloides NCBITaxon:184914 BACDIVE 4 231
Xanthomonas campestris NCBITaxon:339 BACDIVE 5 231
Pseudomonas syringae NCBITaxon:317 BACDIVE 6 231
Microbacterium sp. NCBITaxon:51671 BACDIVE 7 231
Pseudomonas sp. NCBITaxon:306 BACDIVE 8 231
Myxococcus fulvus NCBITaxon:33 BACDIVE 9 231
Frigoribacterium sp. NCBITaxon:1880915 BACDIVE 10 231
Nannocystis exedens NCBITaxon:54 BACDIVE 11 231
Paracidovorax anthurii NCBITaxon:78229 BACDIVE 12 231
Pedobacter sp. NCBITaxon:1411316 BACDIVE 13 231
Acidovorax sp. NCBITaxon:1872122 BACDIVE 14 231
Arthrobacter sp. NCBITaxon:1667 BACDIVE 15 231
Chryseobacterium sp. NCBITaxon:1871047 BACDIVE 16 231
uncultured Rhodococcus sp. NCBITaxon:194249 BACDIVE 17 231
Paracidovorax avenae NCBITaxon:80867 BACDIVE 18 231
Aeromicrobium sp. NCBITaxon:1871063 BACDIVE 19 231
Rathayibacter sp. NCBITaxon:1891630 BACDIVE 20 231
Myxococcus xanthus NCBITaxon:34 BACDIVE 21 231
Pectobacterium carotovorum NCBITaxon:554 BACDIVE 22 231
Agreia sp. NCBITaxon:1872416 BACDIVE 23 231
Aurantimonas sp. NCBITaxon:1872654 BACDIVE 24 231
Pantoea cypripedii NCBITaxon:55209 BACDIVE 25 231

Showing 25 of 50 kept associations.

Also called

Curation

What a curator decided about this record, and why. A record built from several source concepts can carry one decision per concept.

  1. GROUND 2026-08-12 · claude-opus-5

    Grounded to PO:0025034 'leaf' (BROAD). BacDive's leaf/phyllosphere isolation source. BTO:0000713 leaf is broader than the phyllosphere proper (which is the surface), so BROAD rather than EXACT. Merges with the GOLD phylloplane paths. Re-grounded from BTO:0000713 to PO:0025034 now that PO is vendored (#10). (source concept habitatmech:BACDIVE.5aa4da6419)

  2. GROUND 2026-08-12 · claude-opus-5

    Grounded to PO:0025034 'leaf' (BROAD). Phylloplane/leaf surface. BTO:0000713 leaf is broader than the leaf surface proper. Merges with the sibling Phylloplane/Leaf path, which GOLD splits without a clear distinction. Re-grounded from BTO:0000713 to PO:0025034 now that PO is vendored (#10). (source concept habitatmech:GOLD.19a1ce7868)

  3. GROUND 2026-08-12 · claude-opus-5

    Grounded to PO:0025034 'leaf' (BROAD). Phylloplane/leaf. BTO:0000713 leaf is broader than the phyllosphere proper, which is the surface layer. Re-grounded from BTO:0000713 to PO:0025034 now that PO is vendored (#10). (source concept habitatmech:GOLD.8e9f10356e)

Provenance

Generated by scripts/seed_from_sources.py from the committed inventories in data/raw/. View the record.