HabitatMech

HOST_ASSOCIATED

1642 habitat records. Habitats defined by a living host, including anatomical sites.

The source path is shown because a record's label is only the last step of it: "Cattle barn" under Air is the air sampled in a cattle barn, not the barn. The category prefix is trimmed off it, and the identifier lives on each record's own page — the link already carries it.

HOST_ASSOCIATED habitats
HabitatSource pathGroundingAssertionsSources
Mammals: Human Human UNGROUNDED 52129 BACDIVE, GOLD
environmental system determined by an organism Host EXACT 28888 BACDIVE, GOLD
feces Feces-Stool EXACT 22181 BACDIVE, GOLD
plant-associated environment Herbaceous-plants-Grass,Crops EXACT 16295 BACDIVE, ENVIRONMENTS_TABLE, GOLD, MADIN
Blood Mammals: Human > Circulatory system > Blood NARROW 7375 GOLD
Mammals Mammals UNGROUNDED 6104 GOLD
host_animal_endotherm host_animal_endotherm UNGROUNDED 5130 MADIN
Nasopharynx Mammals: Human > Respiratory system > Pharynx/Throat > Nasopharynx NARROW 5080 GOLD
Rumen Mammals > Digestive system > Foregut > Rumen NARROW 4989 GOLD
sputum Mammals: Human > Respiratory system > Sputum/Phlegm EXACT 4968 GOLD
plant plant EXACT 3150 PREGO
Bacteria Microbial > Bacteria UNGROUNDED 3017 GOLD
leaf Leaf-Phyllosphere EXACT 2868 BACDIVE, ENVIRONMENTS_TABLE, GOLD, MADIN
root host_plant_root-associated EXACT 2809 ENVIRONMENTS_TABLE, GOLD
Respiratory system Mammals: Human > Respiratory system NARROW 2496 GOLD
Urine Mammals: Human > Urinary system > Urine NARROW 2290 GOLD
rhizosphere Plants > Roots > Rhizosphere EXACT 2130 GOLD, PREGO
Birds Birds UNGROUNDED 1848 GOLD
Arthropoda: Insects Arthropoda: Insects UNGROUNDED 1833 GOLD
Digestive system Mammals: Human > Digestive system NARROW 1443 GOLD
Nodule Plants > Roots > Nodule NARROW 1422 GOLD
Fish Fish UNGROUNDED 1350 GOLD
skin skin EXACT 1116 PREGO
Oral cavity Mammals: Human > Digestive system > Oral cavity NARROW 1032 GOLD
gut gut EXACT 1005 PREGO
host_animal_ectotherm host_animal_ectotherm UNGROUNDED 999 MADIN
Stomach Mammals: Human > Digestive system > Stomach NARROW 886 GOLD
milk milk EXACT 813 ENVIRONMENTS_TABLE, GOLD, MADIN
root root EXACT 794 PREGO
Mollusca Mollusca UNGROUNDED 784 GOLD
Skin Mammals: Human > Integumentary system > Skin NARROW 754 GOLD
Gut Arthropoda: Insects > Digestive system > Gut NARROW 742 GOLD
respiratory tract respiratory tract EXACT 735 MADIN
Digestive system Mammals > Digestive system NARROW 681 GOLD
Fungi Fungi UNGROUNDED 635 GOLD
wood Timber EXACT 624 BACDIVE, PREGO
Invertebrates Invertebrates UNGROUNDED 621 GOLD
Soil Plants > Roots > Rhizosphere > Soil NARROW 614 GOLD
inflorescence inflorescence EXACT 607 PREGO
Rectum Mammals: Human > Digestive system > Large intestine > Rectum NARROW 602 GOLD
Arthropoda: Crustaceans Arthropoda: Crustaceans UNGROUNDED 598 GOLD
seed Plants > Seeds EXACT 573 GOLD
Arthropoda: Myriapoda Arthropoda: Myriapoda UNGROUNDED 569 GOLD
cecum Mollusca > Digestive system > Hindgut > Cecum/Intestinal cecum EXACT 549 GOLD, PREGO
hemolymph hemolymph EXACT 540 PREGO
stem Plants > Phyllosphere > Stem EXACT 491 GOLD, PREGO
Vagina Mammals: Human > Reproductive system > Vagina NARROW 475 GOLD
Microbial Microbial UNGROUNDED 465 GOLD
Rumen Mammals > Digestive system > Stomach > Rumen NARROW 450 GOLD
blood host_animal_endotherm_blood EXACT 440 ENVIRONMENTS_TABLE, MADIN
mouth mouth EXACT 428 PREGO
root nodule host_plant_rootnodule EXACT 409 ENVIRONMENTS_TABLE, GOLD, MADIN
Ceca Birds > Digestive system > Large intestine > Ceca NARROW 407 GOLD
forearm forearm EXACT 404 PREGO
intestine intestine EXACT 404 PREGO
Mammary gland Mammals > Integumentary system > Mammary gland NARROW 400 GOLD
Algae Algae UNGROUNDED 394 GOLD
hand hand EXACT 392 PREGO
Coral Invertebrates > Cnidaria > Coral NARROW 382 GOLD
adult adult EXACT 378 PREGO
throat Mammals: Human > Respiratory system > Pharynx/Throat EXACT 358 GOLD
urine urine EXACT 345 PREGO
leaf leaf EXACT 342 PREGO
host_animal_endotherm_intratissue host_animal_endotherm_intratissue UNGROUNDED 341 MADIN
tonsil Mammals: Human > Lymphatic system > Tonsils EXACT 328 GOLD, PREGO
Lung Mammals > Respiratory system > Lung NARROW 326 GOLD
Sponge Porifera > Sponge UNGROUNDED 323 GOLD
Ceca Birds > Digestive system > Ceca NARROW 315 GOLD
Cloaca Birds > Digestive system > Large intestine > Cloaca NARROW 309 GOLD
SGS cell SGS cell EXACT 307 PREGO
vagina host_animal_endotherm_vagina EXACT 304 ENVIRONMENTS_TABLE, MADIN
Nematoda Invertebrates > Nematoda UNGROUNDED 300 GOLD
Urethra Mammals: Human > Urinary system > Urethra NARROW 295 GOLD
saliva saliva EXACT 283 PREGO
dorsum dorsum EXACT 278 PREGO
Oral cavity Mammals > Digestive system > Oral cavity NARROW 270 GOLD
mycelium Fungi > Mycelium EXACT 260 GOLD
skin of body Skin,-Nail,-Hair BROAD 260 BACDIVE
Lung Mammals: Human > Respiratory system > Lung NARROW 258 GOLD
oil secretion oil secretion EXACT 256 PREGO
Gastric mucosa Mammals: Human > Digestive system > Stomach > Gastric mucosa NARROW 251 GOLD
Nasal cavity Mammals: Human > Respiratory system > Nasal cavity NARROW 251 GOLD
column column EXACT 246 PREGO
tongue tongue EXACT 245 PREGO
Whole body Arthropoda: Chelicerates > Whole body NARROW 244 GOLD
immune system immune system EXACT 241 PREGO
Rectum Mammals > Digestive system > Large intestine > Rectum NARROW 239 GOLD
style style EXACT 239 PREGO
Brown Algae Algae > Brown Algae UNGROUNDED 231 GOLD
rumen rumen EXACT 231 PREGO
seedling seedling EXACT 228 PREGO
spike spike EXACT 228 PREGO
nectar Plants > Phyllosphere > Anthosphere > Nectar EXACT 227 GOLD, PREGO
Diatoms Algae > Diatoms UNGROUNDED 218 GOLD
crop crop EXACT 218 PREGO
vagina vagina EXACT 218 PREGO
ileum ileum EXACT 216 PREGO
Trachea Mammals: Human > Respiratory system > Trachea NARROW 213 GOLD
vaginal fluid vaginal fluid EXACT 213 PREGO
blood blood EXACT 206 PREGO
Digestive system Arthropoda: Insects > Digestive system NARROW 203 GOLD
Unspecified tissue Mammals > Unspecified system > Unspecified organ > Unspecified tissue NOT_APPLICABLE 201 GOLD
Nasopharynx Mammals > Respiratory system > Pharynx/Throat > Nasopharynx NARROW 194 GOLD
biofilm biofilm EXACT 188 PREGO
Digestive system Birds > Digestive system NARROW 186 GOLD
trachea trachea EXACT 186 PREGO
Nasal cavity Mammals > Respiratory system > Nasal cavity NARROW 184 GOLD
mucosa mucosa EXACT 184 PREGO
Cerebrospinal fluid Mammals: Human > Nervous system > Subarachnoid space > Cerebrospinal fluid NARROW 174 GOLD
Arthropoda: Chelicerates Arthropoda: Chelicerates UNGROUNDED 169 GOLD
Brain Mammals: Human > Nervous system > Brain NARROW 167 GOLD
Cecum Mammals > Digestive system > Large intestine > Cecum NARROW 164 GOLD
pitcher Plants > Pitcher EXACT 161 GOLD, PREGO
Blood Mammals > Circulatory system > Blood NARROW 160 GOLD
Oropharynx Mammals: Human > Digestive system > Pharynx/Throat > Oropharynx NARROW 159 GOLD
lymph node Mammals > Lymphatic system > Lymph nodes EXACT 154 GOLD
Wood Plants > Wood NARROW 153 GOLD
Respiratory system Mammals > Respiratory system NARROW 151 GOLD
juvenile juvenile EXACT 151 PREGO
Annelida Annelida UNGROUNDED 150 GOLD
stomach stomach EXACT 150 PREGO
Phyllosphere Plants > Phyllosphere UNGROUNDED 149 GOLD
Endophytes Plants > Roots > Rhizoplane > Endophytes UNGROUNDED 148 GOLD
Fruiting body Fungi > Fruiting body UNGROUNDED 140 GOLD
flagellum flagellum EXACT 140 PREGO
spore Fungi > Spore EXACT 135 GOLD
Reptilia Reptilia UNGROUNDED 133 GOLD
host_animal_endotherm_rumen host_animal_endotherm_rumen UNGROUNDED 132 MADIN
Bark Plants > Phyllosphere > Caulosphere > Bark NARROW 131 GOLD
Dental plaque Mammals: Human > Digestive system > Oral cavity > Dental plaque NARROW 130 GOLD
rhizome Plants > Rhizome EXACT 130 GOLD
Leaf surface Plants > Phyllosphere > Phylloplane/Leaf > Leaf surface UNGROUNDED 128 GOLD
Urinary system Mammals: Human > Urinary system NARROW 127 GOLD
gastrointestinal tract gastrointestinal tract EXACT 127 PREGO
Saliva Mammals: Human > Digestive system > Oral cavity > Saliva NARROW 125 GOLD
bone element Bone CLOSE 125 BACDIVE, GOLD
trunk trunk EXACT 125 PREGO
Digestive system Fish > Digestive system NARROW 121 GOLD
Skin Mammals > Integumentary system > Skin NARROW 121 GOLD
alimentary canal alimentary canal EXACT 114 PREGO
foot Foot EXACT 114 BACDIVE
Subgingival plaque Mammals: Human > Digestive system > Oral cavity > Subgingival plaque NARROW 113 GOLD
Green algae Algae > Green algae UNGROUNDED 108 GOLD
dental plaque Plaque CLOSE 106 BACDIVE
Regurgitated nectar Arthropoda: Insects > Digestive system > Foregut > Regurgitated nectar UNGROUNDED 103 GOLD
Cnidaria Invertebrates > Cnidaria UNGROUNDED 102 GOLD
respiratory system respiratory system EXACT 100 PREGO
Tissue Plants > Tissue NARROW 98 GOLD
scale scale EXACT 97 PREGO
larva larva EXACT 96 PREGO
spinal column spinal column EXACT 96 PREGO
Cnidaria Cnidaria UNGROUNDED 95 GOLD
Brain Mammals > Nervous system > Brain NARROW 94 GOLD
Larva Arthropoda: Insects > Larva UNGROUNDED 94 GOLD
large intestine large intestine EXACT 93 PREGO
foregut foregut EXACT 92 PREGO
lung lung EXACT 92 PREGO
root nodule root nodule EXACT 91 PREGO
Porifera Porifera UNGROUNDED 90 GOLD
Fecal Arthropoda: Insects > Digestive system > Hindgut > Fecal UNGROUNDED 87 GOLD
bark Plants > Tissue > Bark EXACT 86 GOLD
Lesion Mammals: Human > Integumentary system > Skin > Lesion UNGROUNDED 81 GOLD
Ascidians Tunicates > Ascidians UNGROUNDED 79 GOLD
neonate neonate EXACT 78 PREGO
Liver Mammals > Digestive system > Biliary tract > Liver NARROW 77 GOLD
Ileum Birds > Digestive system > Small intestine > Ileum NARROW 75 GOLD
Red algae Algae > Red algae UNGROUNDED 73 GOLD
gastric mucosa gastric mucosa EXACT 73 PREGO
respiratory airway Airways CLOSE 73 BACDIVE
Decayed wood Plants > Wood > Decayed wood UNGROUNDED 72 GOLD
Urine Mammals > Urinary system > Urine NARROW 70 GOLD
Endosphere Plants > Roots > Endosphere UNGROUNDED 69 GOLD
small intestine small intestine EXACT 69 PREGO
Fecal Amphibia > Digestive system > Intestine > Fecal UNGROUNDED 67 GOLD
Tissue Invertebrates > Cnidaria > Coral > Tissue NARROW 67 GOLD
Lichen Fungi > Lichen UNGROUNDED 66 GOLD
urinary tract urinary tract EXACT 66 PREGO
Lower gastrointestinal tract Mammals > Digestive system > Lower gastrointestinal tract NARROW 65 GOLD
Inner tissue Fungi > Fruiting body > Inner tissue UNGROUNDED 63 GOLD
Integumentary system Mammals > Integumentary system NARROW 63 GOLD
Multiple systems Mammals > Multiple systems UNGROUNDED 63 GOLD
colon colon EXACT 62 PREGO
Oyster Mollusca > Oyster UNGROUNDED 61 GOLD
Remains Birds > Remains UNGROUNDED 60 GOLD
Reproductive system Mammals: Human > Reproductive system NARROW 60 GOLD
Whole body Arthropoda: Insects > Whole body NARROW 60 GOLD
Bivalves Mollusca > Bivalves UNGROUNDED 59 GOLD
area of moss-dominated vegetation Moss CLOSE 59 BACDIVE, GOLD
Reproductive system Mammals > Reproductive system NARROW 58 GOLD
Intestine Fish > Digestive system > Intestine NARROW 57 GOLD
Middle ear Mammals: Human > Auditory/Hearing system > Middle ear NARROW 55 GOLD
Skin tissue Mammals: Human > Integumentary system > Skin > Skin tissue UNGROUNDED 54 GOLD
Respiratory system Birds > Respiratory system NARROW 53 GOLD
Sea Urchin Invertebrates > Echinodermata > Sea Urchin UNGROUNDED 53 GOLD
cecum mucosa cecum mucosa EXACT 53 PREGO
Digital dermatitis Mammals > Integumentary system > Skin > Digital dermatitis UNGROUNDED 52 GOLD
Skin Fish > Integumentary system > Skin NARROW 52 GOLD
head head EXACT 48 PREGO
Liver Birds > Digestive system > Biliary tract > Liver NARROW 46 GOLD
sputum sputum EXACT 45 PREGO
Biofilm Plants > Phyllosphere > Phylloplane/Leaf surface > Biofilm NARROW 42 GOLD
fruit fruit EXACT 42 PREGO
Amphibia Amphibia UNGROUNDED 41 GOLD
Gastric mucosa Mammals > Digestive system > Stomach > Gastric mucosa NARROW 41 GOLD
germ germ EXACT 41 PREGO
kidney Fish > Urinary system > Kidneys EXACT 41 GOLD
Protists Protists UNGROUNDED 40 GOLD
brain brain EXACT 40 PREGO
Spleen Mammals > Lymphatic system > Spleen NARROW 39 GOLD
atherosclerotic plaque atherosclerotic plaque EXACT 39 PREGO
lymphoid tissue lymphoid tissue EXACT 39 PREGO
Bile Mammals: Human > Digestive system > Biliary tract > Bile NARROW 38 GOLD
Dental plaque Mammals > Digestive system > Oral cavity > Dental plaque NARROW 38 GOLD
cerebrospinal fluid cerebrospinal fluid EXACT 38 PREGO
external soft tissue zone Mammals > Multiple systems > Soft tissue CLOSE 38 GOLD
Brain Fish > Nervous system > Brain NARROW 37 GOLD
Large intestine Mammals > Digestive system > Large intestine NARROW 37 GOLD
Skin Birds > Integumentary system > Skin NARROW 37 GOLD
leukocyte leukocyte EXACT 37 PREGO
epithelium epithelium EXACT 35 PREGO
Kidney Mammals > Urinary system > Kidney NARROW 34 GOLD
Placenta Mammals > Fetus > Fetal tissue > Placenta NARROW 34 GOLD
intestinal epithelium intestinal epithelium EXACT 34 PREGO
pseudostem pseudostem EXACT 34 PREGO
joint joint EXACT 33 PREGO
subgingival dental plaque Subgingival-plaque CLOSE 33 BACDIVE
Protozoa Protozoa UNGROUNDED 32 GOLD
T-lymphocyte T-lymphocyte EXACT 32 PREGO
bladder bladder EXACT 32 PREGO
intestinal epithelial cell intestinal epithelial cell EXACT 32 PREGO
Carposphere Plants > Phyllosphere > Carposphere UNGROUNDED 31 GOLD
liver liver EXACT 31 PREGO
mucilage Plants > Roots > Aerial root > Mucilage EXACT 31 GOLD
Blood Birds > Circulatory system > Blood NARROW 30 GOLD
Fecal Reptilia > Digestive system > Large intestine > Fecal UNGROUNDED 30 GOLD
Gills Fish > Respiratory system > Gills NARROW 30 GOLD
Gut Arthropoda: Crustaceans > Digestive system > Gut NARROW 30 GOLD
kidney kidney EXACT 30 PREGO
Bone Mammals: Human > Skeletal system > Bone NARROW 29 GOLD
Uterus Mammals > Reproductive system > Uterus NARROW 29 GOLD
adipose tissue adipose tissue EXACT 29 PREGO
Cervix Mammals: Human > Reproductive system > Uterus > Cervix NARROW 28 GOLD
Endosphere Plants > Endosphere UNGROUNDED 28 GOLD
bronchiole Mammals: Human > Respiratory system > Lung > Bronchioles EXACT 28 GOLD
Nasal cavity Birds > Respiratory system > Nasal cavity NARROW 27 GOLD
Vagina Mammals > Reproductive system > Vagina NARROW 27 GOLD
throat throat EXACT 27 PREGO
Cornea Mammals: Human > Visual system > Eye > Cornea NARROW 26 GOLD
Gingiva Mammals: Human > Digestive system > Oral cavity > Gingiva NARROW 26 GOLD
Midgut Arthropoda: Insects > Digestive system > Midgut NARROW 26 GOLD
head Arthropoda: Insects > Head EXACT 26 GOLD
uroepithelium uroepithelium EXACT 26 PREGO
Peritoneal fluid Mammals: Human > Abdominal/Peritoneal cavity > Peritoneal fluid NARROW 25 GOLD
Trachea Birds > Respiratory system > Trachea NARROW 25 GOLD
urogenital system urogenital system EXACT 25 PREGO
Circulatory system Birds > Circulatory system NARROW 24 GOLD
malpighian tubule Arthropoda: Insects > Excretory system > Malpighian tubules EXACT 24 GOLD
Gut Arthropoda: Myriapoda > Digestive system > Gut NARROW 23 GOLD
Lesion Fish > Integumentary system > Skin > Lesion UNGROUNDED 23 GOLD
Small intestine Mammals > Digestive system > Small intestine NARROW 23 GOLD
Th17 cell Th17 cell EXACT 23 PREGO
Tunicates Tunicates UNGROUNDED 23 GOLD
Large intestine Birds > Digestive system > Large intestine NARROW 22 GOLD
Larvae Mollusca > Larvae UNGROUNDED 22 GOLD
Wood decay Plants > Phyllosphere > Stem > Wood decay UNGROUNDED 22 GOLD
macrophage macrophage EXACT 22 PREGO
Echinodermata Invertebrates > Echinodermata UNGROUNDED 21 GOLD
Gut Arthropoda: Insects > Larva > Gut NARROW 21 GOLD
Periodontal Pocket Mammals: Human > Digestive system > Oral cavity > Periodontal pockets EXACT 21 GOLD
Reproductive system Birds > Reproductive system NARROW 21 GOLD
Rumen fluid Mammals > Digestive system > Stomach > Rumen fluid NARROW 21 GOLD
Stem tuber Plants > Rhizome > Stem tuber UNGROUNDED 21 GOLD
spleen spleen EXACT 21 PREGO
syrinx organ Birds > Respiratory system > Trachea > Syrinx CLOSE 21 GOLD
Conjunctiva Mammals: Human > Visual system > Conjunctiva NARROW 20 GOLD
Heart Mammals > Circulatory system > Heart NARROW 20 GOLD
Hindgut Arthropoda: Insects > Digestive system > Hindgut NARROW 20 GOLD
Large intestine Mammals: Human > Digestive system > Large intestine NARROW 20 GOLD
Lower gastrointestinal tract Mammals: Human > Digestive system > Lower gastrointestinal tract NARROW 20 GOLD
Stomach Mammals > Digestive system > Stomach NARROW 20 GOLD
Visual system Mammals: Human > Visual system NARROW 20 GOLD
epithelial cell epithelial cell EXACT 20 PREGO
filament filament EXACT 20 PREGO
Eggs Arthropoda: Insects > Ootheca/Egg mass > Eggs UNGROUNDED 19 GOLD
Gut Mollusca > Digestive system > Gut NARROW 19 GOLD
HT-29 cell HT-29 cell EXACT 19 PREGO
heart heart EXACT 19 PREGO
rhizoplane Plants > Roots > Rhizoplane EXACT 19 GOLD
Trachea Mammals > Respiratory system > Trachea NARROW 18 GOLD
blast cell blast cell EXACT 18 PREGO
bronchus Bronchial-wash CLOSE 18 BACDIVE
enterocyte enterocyte EXACT 18 PREGO
midgut midgut EXACT 18 PREGO
regulatory T-lymphocyte regulatory T-lymphocyte EXACT 18 PREGO
vegetative cell vegetative cell EXACT 18 PREGO
Abscess Mammals: Human > Integumentary system > Skin > Abscess NARROW 17 GOLD
Colon mucosa Mammals: Human > Digestive system > Large intestine > Colon mucosa NARROW 17 GOLD
Digestive system Mollusca > Digestive system NARROW 17 GOLD
Gills Mollusca > Respiratory system > Gills NARROW 17 GOLD
Rectum Birds > Digestive system > Large intestine > Rectum NARROW 17 GOLD

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