vagina

UBERON:0000996 ·resolve ·HOST_ASSOCIATED ·EXACT SEEDED

A fibromuscular tubular tract leading from the uterus to the exterior of the body in female placental mammals and marsupials, or to the cloaca in female birds, monotremes, and some reptiles[WP]. — UBERON

SEEDED workflow status. The source-seeding rules supplied this record; consult its curation history for later attributed changes. This status does not establish human review.

Source attestations

Each upstream vocabulary's own account of this habitat. Assertion counts are per-source units and are not comparable across sources — GOLD counts organisms, BacDive strains, PREGO taxa.

What each upstream vocabulary says about this habitat
Source	Label / path	Assertions	Unit
ENVIRONMENTS_TABLE	host_animal_endotherm_vagina Physicochemical parameter bands from kg-microbe's environment table.	—
MADIN	vagina	304	TAXON

Broader habitats

mesoderm-derived structure UBERON:0004120
subdivision of oviduct UBERON:0013515

Environmental parameters

Physicochemical parameters
Parameter	Value	Source
GRADIENTS	high	kg-microbe environments.csv (host_animal_endotherm_vagina)
NUTRIENTS	high	kg-microbe environments.csv (host_animal_endotherm_vagina)
ORGANIC_MATTER	high	kg-microbe environments.csv (host_animal_endotherm_vagina)
PH	low	kg-microbe environments.csv (host_animal_endotherm_vagina)
PRESSURE	low	kg-microbe environments.csv (host_animal_endotherm_vagina)
SALINITY	medium	kg-microbe environments.csv (host_animal_endotherm_vagina)
SALINITY_VARIABILITY	small	kg-microbe environments.csv (host_animal_endotherm_vagina)
STRUCTURAL_COMPLEXITY	high	kg-microbe environments.csv (host_animal_endotherm_vagina)
TEMPERATURE	medium	kg-microbe environments.csv (host_animal_endotherm_vagina)
TEMPERATURE_VARIABILITY	low	kg-microbe environments.csv (host_animal_endotherm_vagina)
WATER_AVAILABILITY	high	kg-microbe environments.csv (host_animal_endotherm_vagina)
WATER_VARIABILITY	permanently wet	kg-microbe environments.csv (host_animal_endotherm_vagina)

Associated taxa

Taxa reported from this habitat, which is weaker than being characteristic of it. rank is out of pool: a high rank in a pool of thousands of near-tied scores is a weak claim. Entries corroborated by a second, independent source are listed first.

Taxa reported from this habitat
Taxon	Source	Rank	Pool
Actinomyces canis `NCBITaxon:100469`	MADIN	—	304
Gardnerella vaginalis HMP9231 `NCBITaxon:1009464`	MADIN	—	304
Escherichia coli NA114 `NCBITaxon:1033813`	MADIN	—	304
Actinomyces urogenitalis `NCBITaxon:103621`	MADIN	—	304
Escherichia coli O55:H7 str. RM12579 `NCBITaxon:1048689`	MADIN	—	304
Corynebacterium uterequi `NCBITaxon:1072256`	MADIN	—	304
Pasteurella multocida 36950 `NCBITaxon:1075089`	MADIN	—	304
Haemophilus parainfluenzae HK262 `NCBITaxon:1095745`	MADIN	—	304
Pasteurella bettyae CCUG 2042 `NCBITaxon:1095749`	MADIN	—	304
Lactobacillus jensenii `NCBITaxon:109790`	MADIN	—	304
Atopobium sp. BV3AC4 `NCBITaxon:1111121`	MADIN	—	304
Megasphaera sp. BV3C16-1 `NCBITaxon:1111454`	MADIN	—	304
Campylobacter ureolyticus DSM 20703 `NCBITaxon:1121102`	MADIN	—	304
Corynebacterium ciconiae DSM 44920 `NCBITaxon:1121356`	MADIN	—	304
Mycoplasma gallinarum DSM 19816 `NCBITaxon:1122248`	MADIN	—	304
Pasteurella langaaensis DSM 22999 `NCBITaxon:1122935`	MADIN	—	304
Prevotella corporis DSM 18810 `NCBITaxon:1122981`	MADIN	—	304
Lactobacillus pentosus KCA1 `NCBITaxon:1136177`	MADIN	—	304
mycoplasma_columbinasale `NCBITaxon:114880`	MADIN	—	304
Streptococcus agalactiae CCUG 44077 `NCBITaxon:1154817`	MADIN	—	304
Streptococcus agalactiae LMG 15091 `NCBITaxon:1154820`	MADIN	—	304
Streptococcus agalactiae LMG 15092 `NCBITaxon:1154821`	MADIN	—	304
Streptococcus agalactiae LMG 15093 `NCBITaxon:1154822`	MADIN	—	304
Streptococcus agalactiae LMG 15094 `NCBITaxon:1154823`	MADIN	—	304
Streptococcus agalactiae CCUG 34230 `NCBITaxon:1154862`	MADIN	—	304

Also called

distal oviductal region — UBERON
distal portion of oviduct — UBERON
vaginae — UBERON

Provenance

Generated by scripts/seed_from_sources.py from the committed inventories in data/raw/. View the record.