HabitatMech

vagina

UBERON:0000996 ·resolve ·HOST_ASSOCIATED ·EXACT SEEDED

A fibromuscular tubular tract leading from the uterus to the exterior of the body in female placental mammals and marsupials, or to the cloaca in female birds, monotremes, and some reptiles[WP]. — UBERON

Source attestations

Each upstream vocabulary's own account of this habitat. Assertion counts are per-source units and are not comparable across sources — GOLD counts organisms, BacDive strains, PREGO taxa.

What each upstream vocabulary says about this habitat

Source	Label / path	Assertions	Unit
ENVIRONMENTS_TABLE	host_animal_endotherm_vagina Physicochemical parameter bands from kg-microbe's environment table.	—
MADIN	vagina	304	TAXON

Broader habitats

• mesoderm-derived structure UBERON:0004120
• subdivision of oviduct UBERON:0013515

Environmental parameters

Physicochemical parameters

Parameter	Value	Source
GRADIENTS	high	kg-microbe environments.csv (host_animal_endotherm_vagina)
NUTRIENTS	high	kg-microbe environments.csv (host_animal_endotherm_vagina)
ORGANIC_MATTER	high	kg-microbe environments.csv (host_animal_endotherm_vagina)
PH	low	kg-microbe environments.csv (host_animal_endotherm_vagina)
PRESSURE	low	kg-microbe environments.csv (host_animal_endotherm_vagina)
SALINITY	medium	kg-microbe environments.csv (host_animal_endotherm_vagina)
SALINITY_VARIABILITY	small	kg-microbe environments.csv (host_animal_endotherm_vagina)
STRUCTURAL_COMPLEXITY	high	kg-microbe environments.csv (host_animal_endotherm_vagina)
TEMPERATURE	medium	kg-microbe environments.csv (host_animal_endotherm_vagina)
TEMPERATURE_VARIABILITY	low	kg-microbe environments.csv (host_animal_endotherm_vagina)
WATER_AVAILABILITY	high	kg-microbe environments.csv (host_animal_endotherm_vagina)
WATER_VARIABILITY	permanently wet	kg-microbe environments.csv (host_animal_endotherm_vagina)

Associated taxa

Taxa reported from this habitat, which is weaker than being characteristic of it. rank is out of pool: a high rank in a pool of thousands of near-tied scores is a weak claim. Entries corroborated by a second, independent source are listed first.

Taxa reported from this habitat

Taxon	Source	Rank	Pool	Corroborated
Actinomyces canis NCBITaxon:100469	MADIN	—	304
Gardnerella vaginalis HMP9231 NCBITaxon:1009464	MADIN	—	304
Escherichia coli NA114 NCBITaxon:1033813	MADIN	—	304
Actinomyces urogenitalis NCBITaxon:103621	MADIN	—	304
Escherichia coli O55:H7 str. RM12579 NCBITaxon:1048689	MADIN	—	304
Corynebacterium uterequi NCBITaxon:1072256	MADIN	—	304
Pasteurella multocida 36950 NCBITaxon:1075089	MADIN	—	304
Haemophilus parainfluenzae HK262 NCBITaxon:1095745	MADIN	—	304
Pasteurella bettyae CCUG 2042 NCBITaxon:1095749	MADIN	—	304
Lactobacillus jensenii NCBITaxon:109790	MADIN	—	304
Atopobium sp. BV3AC4 NCBITaxon:1111121	MADIN	—	304
Megasphaera sp. BV3C16-1 NCBITaxon:1111454	MADIN	—	304
Campylobacter ureolyticus DSM 20703 NCBITaxon:1121102	MADIN	—	304
Corynebacterium ciconiae DSM 44920 NCBITaxon:1121356	MADIN	—	304
Mycoplasma gallinarum DSM 19816 NCBITaxon:1122248	MADIN	—	304
Pasteurella langaaensis DSM 22999 NCBITaxon:1122935	MADIN	—	304
Prevotella corporis DSM 18810 NCBITaxon:1122981	MADIN	—	304
Lactobacillus pentosus KCA1 NCBITaxon:1136177	MADIN	—	304
mycoplasma_columbinasale NCBITaxon:114880	MADIN	—	304
Streptococcus agalactiae CCUG 44077 NCBITaxon:1154817	MADIN	—	304
Streptococcus agalactiae LMG 15091 NCBITaxon:1154820	MADIN	—	304
Streptococcus agalactiae LMG 15092 NCBITaxon:1154821	MADIN	—	304
Streptococcus agalactiae LMG 15093 NCBITaxon:1154822	MADIN	—	304
Streptococcus agalactiae LMG 15094 NCBITaxon:1154823	MADIN	—	304
Streptococcus agalactiae CCUG 34230 NCBITaxon:1154862	MADIN	—	304

Also called

• distal oviductal region — UBERON
• distal portion of oviduct — UBERON
• vaginae — UBERON

Provenance

Generated by scripts/seed_from_sources.py from the committed inventories in data/raw/. View the record.