HabitatMech

Rumen-fluid

habitatmech:BACDIVE.25af5eede6 ·HOST_ASSOCIATED ·NARROW REVIEWED

Source attestations

Each upstream vocabulary's own account of this habitat. Assertion counts are per-source units and are not comparable across sources — GOLD counts organisms, BacDive strains, PREGO taxa.

What each upstream vocabulary says about this habitat
SourceLabel / pathAssertionsUnit
BACDIVE Rumen-fluid 10 STRAIN

Broader habitats

Associated taxa

Taxa reported from this habitat, which is weaker than being characteristic of it. rank is out of pool: a high rank in a pool of thousands of near-tied scores is a weak claim. Entries corroborated by a second, independent source are listed first.

Taxa reported from this habitat
TaxonSourceRankPoolCorroborated
Actinomyces sp. NCBITaxon:29317 BACDIVE 1 9
Butyrivibrio hungatei DSM 14810 NCBITaxon:1121132 BACDIVE 2 9
Pseudobutyrivibrio xylanivorans DSM 14809 NCBITaxon:1123012 BACDIVE 3 9
Methanobrevibacter boviskoreani NCBITaxon:1348249 BACDIVE 4 9
Clostridium lundense DSM 17049 NCBITaxon:1410653 BACDIVE 5 9
Agathobacter ruminis NCBITaxon:1712665 BACDIVE 6 9
Methanobrevibacter olleyae NCBITaxon:294671 BACDIVE 7 9
Parafannyhessea umbonata NCBITaxon:604330 BACDIVE 8 9
Desulfovibrio sp. NCBITaxon:885 BACDIVE 9 9

Curation

What a curator decided about this record, and why. A record built from several source concepts can carry one decision per concept.

  1. GROUND_AS_PARENT 2026-08-13 · claude-opus-5

    UBERON:0007365 'rumen' attached as a parent, not adopted as the identity (NARROW). Rumen fluid, held in the rumen; ENVO:02000140 fluid environmental material is too generic to be useful. Category set to HOST_ASSOCIATED (#205): rumen fluid is held in the rumen, and CLAUDE.md states that anatomical host parts ground normally as host habitats. 667 of the 672 records with a UBERON parent are HOST_ASSOCIATED, and 8 of the 9 under UBERON:0007365 'rumen' itself. Same cause as #200 - a blank category column. The reasoning above is unchanged. (source concept habitatmech:BACDIVE.25af5eede6)

Provenance

Generated by scripts/seed_from_sources.py from the committed inventories in data/raw/. View the record.