quality

METPO:1000188 · CLASS · REVIEWED

A characteristic of an entity that depends on the entity's existence, size, color, and physiological traits.

Quality upper-class child context

DOI-backed upper-ontology context graph linking quality to phenotype and biosafety-level child classes while excluding the genomic GC content child from this batch.

Edge evidence

quality characterizes material entity
Qualities characterize or inhere in entities.
- DOI:10.1186/gb-2010-11-1-r2 specific characteristic or quality of that entity Supports entity-dependent qualities in phenotype descriptions.
phenotype is a quality rdfs:subClassOf
Phenotype is a quality-derived child class in TraitMech.
- DOI:10.1186/gb-2010-11-1-r2 Phenotype and Trait ontology Supports phenotype and trait descriptions using quality classes.
biosafety level is a quality rdfs:subClassOf
Biosafety level is a reviewed non-genomic child quality in TraitMech's ecology category.
- DOI:10.1146/annurev.micro.62.081307.162938 virulence factors Supports hazard-related biological-agent properties as inputs to biosafety-level classification.

Provenance

Source: METPO (2025-11-25)
Definition source: DOI:10.1186/gb-2010-11-1-r2

Children (13)

kg-microbe context

Matched 1 kg-microbe node via direct_metpo.

METPO:1000188 [-0.956, -1.962, -3.148, +1.274, …]

512-dim DeepWalkSkipGramEnsmallen embedding from kg-microbe (2026-04-25).

Nearest neighbors in embedding space

Top-8 cosine-similar METPO traits from the 2026-04-25 deepwalk (512-D).

genomics prophage 1.000
genomics genome streamlining 1.000
genomics genome size 1.000
genomics pangenome openness 1.000
genomics plasmid carriage 1.000
genomics ploidy 1.000
genomics restriction-modification system 1.000
genomics GC skew 1.000

Curation history

2026-05-05T01:35:46.812123+00:00 · SEEDED_FROM_METPO · seed_from_metpo
imported from data/raw/metpo.owl (CLASS)
2026-05-15T00:35:00-07:00 · CURATED_UPPER_CONTEXT · codex
Reviewed quality as an upper classifier and added a DOI-backed context graph covering non-genomic child classes phenotype and biosafety level.
2026-05-20T03:35:32Z · GROUND_CAUSAL_PREDICATES · claude
Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (rdfs:subClassOf×2).