manganese oxidation
traitmech:000032 · CLASS · REVIEWED
A metabolism in which bacteria oxidize soluble Mn(II) to insoluble Mn(III/IV) oxides, typically catalyzed by multicopper oxidases. Characteristic of organisms such as Bacillus sp. SG-1, Leptothrix, and Pseudomonas putida.
Manganese oxidation produces insoluble Mn(III/IV) oxides
Edge evidence
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multicopper oxidase
enables
manganese oxidation
RO:0002327Multicopper oxidases catalyze the Mn(II) → Mn(III/IV) oxidation step.
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DOI:10.1016/j.tim.2005.07.009
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manganese oxidation
produces
Mn(III/IV) oxides
METPO:2000202The metabolism deposits biogenic Mn(III/IV) oxides.
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DOI:10.1146/annurev.earth.32.101802.120213
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molecular oxygen (O2)
enables
manganese oxidation
RO:0002327O2 serves as the direct oxidant enabling multicopper-oxidase-mediated Mn(II) oxidation.
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DOI:10.1021/jacs.3c06537
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manganese oxidation
produces
Mn(III)(OH)Mn(III) intermediate
METPO:2000202A cooperative two-electron oxidation step produces a Mn(III)(OH)Mn(III) intermediate.
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DOI:10.1021/jacs.3c06537
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Mn(III)(OH)Mn(III) intermediate
disproportionates to form
Mn(IV)(O)Mn(IV) intermediate
Two Mn(III)(OH)Mn(III) species disproportionate to form Mn(IV)(O)Mn(IV).
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DOI:10.1021/jacs.3c06537
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Mn(IV)(O)Mn(IV) intermediate
condenses into
MnO2 nanoparticles
Mn(IV)(O)Mn(IV) condenses en route to MnO2 nanoparticle release.
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DOI:10.1021/jacs.3c06537
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MnO2 nanoparticles
is a
Mn(III/IV) oxides
rdfs:subClassOfMnO2 nanoparticles are a form of the insoluble biogenic Mn(III/IV) oxide product.
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DOI:10.1021/jacs.3c06537
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Provenance
- Source
- METPO (2025-11-25)
- Definition source
- DOI:10.1016/j.tim.2005.07.009
Parent traits (1)
Synonyms (1)
- Mn(II) oxidation
kg-microbe context
Matched 1 kg-microbe node via parent_proxy.
METPO:1000060[-1.052, -1.766, -1.194, +0.291, …]
Nearest neighbors in embedding space
- metabolism lignin degradation 1.000
- metabolism sulfur oxidation 1.000
- metabolism starch degradation 1.000
- metabolism reductive tricarboxylic acid cycle 1.000
- metabolism proteorhodopsin phototrophy 1.000
- metabolism proteolysis 1.000
- metabolism phototrophy 1.000
- metabolism photosynthesis 1.000
Curation history
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PROPOSED_FROM_RESEARCH · claude
Proposed candidate METABOLISM trait (manganese oxidation) from literature research to fill the metal-redox metabolism gap.
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CURATED_CAUSAL_GRAPH · claude
Added evidence-backed causal graph (multicopper-oxidase Mn(II) → Mn(III/IV) oxidation) with RO/METPO predicate groundings; promoted PROPOSED to REVIEWED.
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GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (UniProtKB:A0A059ZYC2×1).
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ENRICH_CAUSAL_GRAPH · claude
Added 5 evidence-backed generic edges (4 new nodes) from the deep-research report.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 3 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002327×1, METPO:2000202×1, rdfs:subClassOf×1).