cell length very small
METPO:1000883 · CLASS · REVIEWED
A cell-length phenotype in which the longer cell dimension is at most approximately 1.3 micrometers.
Very-small cell-length streamlining
Edge evidence
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oligotrophic environment
regulates
streamlining selection
RO:0002211Persistent oligotrophy selects for streamlined cells and genomes.
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DOI:10.1038/ismej.2014.60small cells and genomes
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streamlining selection
produces
cell length very small
METPO:2000202Streamlining selection produces very small cell length values.
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DOI:10.1038/ismej.2014.60small cells
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cell length very small
is a
cell length
rdfs:subClassOfVery small cell length is a quantitative bin of the cell-length phenotype.
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DOI:10.1016/j.cub.2014.07.022cell size is tightly controlled
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oligotrophic environment
selects for
genome streamlining
METPO:2007401Oligotrophic environments select for genome streamlining.
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DOI:10.1128/mSphereDirect.00011-19
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carbon limitation
associated with
genome streamlining
biolink:associated_withCarbon limitation is associated with genome streamlining.
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DOI:10.1128/mSphereDirect.00011-19
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nitrogen limitation
associated with
genome streamlining
biolink:associated_withNitrogen limitation is associated with genome streamlining.
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DOI:10.1128/mSphereDirect.00011-19
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genome streamlining
contributes to
cell length very small
RO:0002326Genome streamlining contributes to very small cell size.
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DOI:10.1038/s41467-024-48591-9
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reduced transcriptional regulation
enhances fitness in
nutrient-poor environment
Reduced transcriptional regulation enhances fitness in nutrient-poor environments, a companion of streamlining.
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DOI:10.1128/MMBR.00124-22
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Provenance
- Source
- METPO (2025-11-25)
- Definition source
- DOI:10.1038/ismej.2014.60
Parent traits (1)
Synonyms (1)
- L_<=1.3
kg-microbe context
Matched 1 kg-microbe node via direct_metpo.
METPO:1000883[-1.058, -2.584, -0.836, +2.454, …]
Nearest neighbors in embedding space
- morphology cell width very small 0.645
- environment pH range mid2 0.612
- environment pH range low 0.610
- environment pH range mid1 0.585
- environment pH range mid3 0.580
- environment temperature range mid1 0.576
- environment temperature delta mid2 0.567
- environment temperature range low 0.562
Curation history
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·
SEEDED_FROM_METPO · seed_from_metpo
imported from data/raw/metpo.owl (CLASS)
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·
CURATED_CAUSAL_GRAPH · claude
Added DOI-backed causal graph linking oligotrophic streamlining selection to very small cell length.
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·
GROUND_CAUSAL_PREDICATES · claude
Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2000202×1, rdfs:subClassOf×1).
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·
RENAME_PREDICATE_LABELS · claude
Renamed 1 causal-edge predicate label(s) to align with existing groundings: drives → regulates ×1.
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·
GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002211×1).
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·
ENRICH_CAUSAL_GRAPH · claude
Added 5 evidence-backed generic edges (5 new nodes) from the deep-research report.
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·
GROUND_CAUSAL_PREDICATES · claude
Grounded 4 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (biolink:associated_with×2, METPO:2007401×1, RO:0002326×1).