cell length

METPO:1000881 · CLASS · REVIEWED

A phenotype that inheres in a cell by virtue of its longer dimension when viewed on a plane.

Cell-length control by growth and division timing

DOI-backed graph linking growth rate, division-site placement, and the adder size-control principle to the observed cell-length phenotype.

Cell-length control by growth and division timing Interactive directed graph showing evidence-backed causal relationships for cell length.

Edge evidence

  • elongation rate contributes to cell length RO:0002326

    Elongation rate sets how rapidly a cell extends along its long axis between divisions.

    • DOI:10.1016/j.cub.2014.07.022 cell size is tightly controlled Supports growth/elongation rate as a determinant of cell size.
  • adder size control regulates cell length RO:0002211

    Adder size control sets the inter-division length increment that determines average cell length.

    • DOI:10.1016/j.cell.2014.11.022 cells grow by a fixed amount between divisions Supports the adder principle as the size-control rule producing the length distribution.
  • FtsZ ring (divisome) assembles at division-site placement

    FtsZ assembles at the future division site to initiate cytokinesis.

    • DOI:10.1038/nrmicro2671 FtsZ ring at the future division site Supports FtsZ-ring assembly as the proximate divisome event.
  • division-site placement causes cytokinesis biolink:causes

    Division-site placement directs constriction and cytokinesis.

    • DOI:10.1038/nrmicro2671 directs cell division Supports division-site placement as the trigger for cytokinesis.
  • cytokinesis resets cell length

    Cytokinesis halves the mother cell, resetting daughter cell length.

    • DOI:10.1016/j.cell.2014.11.022 cells grow by a fixed amount between divisions Supports division as the event that resets length each generation.
  • Rod complex (elongasome) mediates sidewall peptidoglycan synthesis

    The Rod complex/elongasome drives sidewall peptidoglycan synthesis.

    • DOI:10.3389/fcimb.2023.1205488 elongasome drives sidewall peptidoglycan synthesis necessary for rod shape and lengthening of the cell prior to division.
  • sidewall peptidoglycan synthesis contributes to cell length RO:0002326

    Sidewall PG synthesis lengthens the cell prior to division.

    • DOI:10.3389/fcimb.2023.1205488 sidewall peptidoglycan synthesis necessary for the lengthening of the cell prior to division.
  • Rod complex (elongasome) mediates elongation rate

    The Rod complex/elongasome mediates cell elongation.

    • DOI:10.1038/s42003-024-07279-y elongation is mediated by the Rod complex (the elongasome).
  • FtsA and ZipA (proto-ring tethers) attaches FtsZ ring (divisome)

    FtsA and ZipA tether FtsZ to the membrane forming the proto-ring.

    • DOI:10.1038/s41579-023-00942-x FtsZ membrane attachment depends on tethers FtsA and ZipA (the proto-ring).
  • FtsWI septal PG synthase drives septum synthesis

    FtsWI septal PG synthases drive septum synthesis.

    • DOI:10.1038/s41579-023-00942-x essential septal peptidoglycan synthases FtsW and FtsI (FtsWI) that drive septum synthesis.
  • septum synthesis contributes to cytokinesis RO:0002326

    Septum synthesis drives division constriction completing cytokinesis.

    • DOI:10.1038/s41579-023-00942-x inactivation of essential divisome proteins blocks division, altering cell length; septum synthesis drives division constriction.
  • Min system and nucleoid occlusion regulates division-site placement RO:0002211

    Min system and nucleoid occlusion determine division site placement via localized negative regulation of FtsZ polymerization.

    • DOI:10.1038/s41579-023-00942-x the Min system and nucleoid occlusion act as localized negative regulators of FtsZ polymerization and thus determine division site placement.

Provenance

Source
METPO (2025-11-25)
Definition source
DOI:10.1016/j.cub.2014.07.022

Parent traits (1)

kg-microbe context

Matched 1 kg-microbe node via direct_metpo.

  • METPO:1000881 [-1.413, -1.159, -3.315, +0.964, …]

512-dim DeepWalkSkipGramEnsmallen embedding from kg-microbe (2026-04-25).

Nearest neighbors in embedding space

Top-8 cosine-similar METPO traits from the 2026-04-25 deepwalk (512-D).

Curation history

  1. · SEEDED_FROM_METPO · seed_from_metpo

    imported from data/raw/metpo.owl (CLASS)

  2. · CURATED_CAUSAL_GRAPH · claude

    Added DOI-backed causal graph linking elongation rate, adder size control, FtsZ-divisome division-site placement, and cytokinesis to cell length.

  3. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002326×1, RO:0002211×1).

  4. · RENAME_PREDICATE_LABELS · claude

    Renamed 1 causal-edge predicate label(s) to align with existing groundings: triggers → causes ×1.

  5. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (biolink:causes×1).

  6. · GROUND_CAUSAL_NODES · claude

    Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (GO:0000910×1).

  7. · ENRICH_CAUSAL_GRAPH · claude

    Added 7 evidence-backed generic edges (6 new nodes) from the deep-research report.

  8. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 3 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002326×2, RO:0002211×1).