cell length medium
METPO:1000885 · CLASS · REVIEWED
A cell-length phenotype in which the longer cell dimension lies approximately between 2 and 3 micrometers.
Medium cell-length under moderate growth
Edge evidence
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moderate growth rate
feeds into
growth-rate size law
Moderate exponential growth rates engage the growth-rate size law.
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DOI:10.1126/science.aaa1313cell size scales with growth rate
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growth-rate size law
produces
cell length medium
METPO:2000202At moderate growth rates the size law produces medium cell length.
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DOI:10.1126/science.aaa1313cell size scales with growth rate
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cell length medium
is a
cell length
rdfs:subClassOfMedium cell length is a quantitative bin of the cell-length phenotype.
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DOI:10.1016/j.cub.2014.07.022cell size is tightly controlled
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RodA-PBP2 complex
enables
peptidoglycan insertion during elongation
RO:0002327RodA glycosyltransferase and PBP2 transpeptidase together enable peptidoglycan insertion that drives elongation.
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DOI:10.1002/mbo3.1385
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MreC/MreD balance
modulates
PBP2 transpeptidase activity
RO:0002211The balance between MreC and MreD modulates PBP2, the essential elongation transpeptidase.
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DOI:10.1002/mbo3.1385
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Rod complex (elongasome)
increases
peptidoglycan density / mechanical strength
RO:0002213An intact Rod complex builds dense peptidoglycan; loss yields PG with large holes and reduced mechanical strength.
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DOI:10.1002/mbo3.1385
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peptidoglycan density / mechanical strength
maintains
rod shape
Dense peptidoglycan produced by the elongation machinery maintains rod shape, the morphology context for medium cell length.
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DOI:10.1002/mbo3.1385
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membrane synthesis
balances with PG synthesis to maintain
PG-membrane envelope balance
Balanced membrane and peptidoglycan synthesis is critical; reducing membrane synthesis restores balance when PG capacity is limited.
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DOI:10.1128/mbio.00475-23
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Provenance
- Source
- METPO (2025-11-25)
- Definition source
- DOI:10.1126/science.aaa1313
Parent traits (1)
Synonyms (1)
- L_2_3
kg-microbe context
Matched 1 kg-microbe node via direct_metpo.
METPO:1000885[-0.546, -0.957, -2.038, +2.464, …]
Nearest neighbors in embedding space
- morphology cell width medium 0.613
- environment temperature range mid1 0.600
- environment temperature range very low 0.600
- environment pH range mid2 0.595
- environment temperature delta mid2 0.594
- environment temperature range low 0.594
- environment pH range mid1 0.593
- environment pH range low 0.581
Curation history
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·
SEEDED_FROM_METPO · seed_from_metpo
imported from data/raw/metpo.owl (CLASS)
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CURATED_CAUSAL_GRAPH · claude
Added DOI-backed causal graph linking moderate growth rate and the growth-rate size law to medium cell length (2–3 μm).
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GROUND_CAUSAL_PREDICATES · claude
Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2000202×1, rdfs:subClassOf×1).
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·
ENRICH_CAUSAL_GRAPH · claude
Added 5 evidence-backed generic edges (9 new nodes) from the deep-research report.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 3 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002327×1, RO:0002211×1, RO:0002213×1).