temperature range very low
METPO:1000448 · CLASS · REVIEWED
A temperature range phenotype in which growth extends to ambient temperatures at or below approximately 10 °C, characteristic of psychrophilic growth ranges.
Temperature-range-very-low psychrophile range
Edge evidence
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psychrophile cold-adapted machinery
enables
temperature range very low
RO:0002327Psychrophile cold-adapted machinery enables growth at ≤ 10 °C.
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DOI:10.1038/sj.embor.7400662decreased membrane fluidity
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temperature range very low
is a
temperature range
rdfs:subClassOfTemperature range very low is a quantitative bin of the temperature-range phenotype.
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DOI:10.1038/sj.embor.7400662growing well at temperatures around the freezing point of water
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membrane fatty-acid desaturation
increases
membrane fluidity
RO:0002213Homeoviscous adaptation via lipid desaturation maintains membrane fluidity in the cold.
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DOI:10.1007/s42770-023-01057-4
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low temperature
activates
two-component cold signaling
RO:0002213Cold-induced membrane state changes activate two-component cold signaling.
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DOI:10.1007/s42770-023-01057-4
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cold-shock proteins (CspA-family)
acts on
mRNA/RNA secondary structure
CspA-family RNA chaperones resolve cold-stabilized RNA structures to sustain translation.
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DOI:10.1007/s42770-023-01057-4
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molecular chaperones (DnaK/GroEL/GroES/Clp/TF)
preserves
protein folding and proteostasis in the cold
Chaperone/protease systems counter cold-slowed folding and misfolding risk.
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DOI:10.3389/fmicb.2023.1197797
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compatible solutes (glycine betaine/trehalose/glycerol)
stabilizes
protein and membrane stabilization
Osmolytes lower freezing damage and stabilize proteins and membranes.
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DOI:10.3389/fmicb.2023.1197797
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ice-binding/antifreeze proteins
inhibits
ice-crystal growth/recrystallization
RO:0002212AFPs/IBPs bind ice and inhibit ice-crystal growth and recrystallization.
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DOI:10.3389/fmicb.2023.1197797
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Provenance
- Source
- METPO (2025-11-25)
- Definition source
- DOI:10.1038/sj.embor.7400662
Parent traits (1)
Synonyms (2)
- Psychrophile
- TR_<=10
kg-microbe context
Matched 1 kg-microbe node via direct_metpo.
METPO:1000448[-3.031, -0.161, -1.423, +4.596, …]
Nearest neighbors in embedding space
- environment temperature delta high 0.813
- environment temperature range low 0.811
- environment temperature range mid1 0.774
- environment pH range mid2 0.772
- environment pH range low 0.768
- environment pH range mid3 0.760
- environment pH range mid1 0.758
- environment temperature delta mid2 0.742
Curation history
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·
SEEDED_FROM_METPO · seed_from_metpo
imported from data/raw/metpo.owl (CLASS)
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·
CURATED_CAUSAL_GRAPH · claude
Added DOI-backed definition and causal graph linking psychrophile cold-adapted machinery to the temperature-range-very-low bin.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002327×1, rdfs:subClassOf×1).
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·
ENRICH_CAUSAL_GRAPH · claude
Added 6 evidence-backed generic edges (12 new nodes) from the deep-research report.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 3 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002213×2, RO:0002212×1).
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·
GROUND_CAUSAL_NODES · claude
Grounded 2 causal-node grounding field(s) via mappings/node_grounding.tsv (PATO:0001306×1, METPO:1007505×1).