temperature range

METPO:1000306 · CLASS · REVIEWED

A temperature phenotype with numerical limits that bounds the minimum and maximum ambient temperatures supporting growth of an organism.

Temperature-range bounded thermal adaptation

DOI-backed graph linking cold- and heat-tolerance to the bounded span of growth-supporting ambient temperatures.

Temperature-range bounded thermal adaptation Interactive directed graph showing evidence-backed causal relationships for temperature range.

Edge evidence

  • ambient temperature defines bounded temperature growth window METPO:2007500

    Ambient temperature defines the axis over which the growth window is bounded.

    • DOI:10.1016/s0300-9629(97)00003-0 adapted to environments of high temperature Supports ambient temperature as the axis bounding the growth window.
  • cold tolerance defines bounded temperature growth window METPO:2007500

    Cold tolerance sets the lower bound of the temperature growth window.

    • DOI:10.1038/sj.embor.7400662 decreased membrane fluidity Supports cold-end membrane and enzyme adaptation as the lower-bound mechanism.
  • heat tolerance defines bounded temperature growth window METPO:2007500

    Heat tolerance sets the upper bound of the temperature growth window.

    • DOI:10.1128/MMBR.65.1.1-43.2001 resistant to irreversible inactivation at high temperatures Supports protein-thermostability physiology as the upper-bound mechanism.
  • bounded temperature growth window manifests as temperature range METPO:2007400

    The bounded temperature growth window manifests the temperature-range phenotype.

    • DOI:10.1016/s0300-9629(97)00003-0 adapted to environments of high temperature Supports the trait endpoint.
  • ambient temperature increases membrane lipid unsaturation RO:0002213

    Decreased ambient temperature increases membrane lipid unsaturation via homeoviscous adaptation.

    • DOI:10.1007/s12275-023-00031-x E. coli increases unsaturated cis-vaccenic acid and decreases palmitic acid with cold; broad bacterial mechanism affecting the lower growth bound.
  • lipid desaturase activity increases membrane fluidity RO:0002213

    Lipid desaturase activity increases membrane fluidity at low temperature.

    • DOI:10.37256/amtt.5220244537 Upregulation of genes for fatty acid synthesis/desaturation maintains membrane fluidity at low temperature.
  • membrane lipid unsaturation increases membrane fluidity RO:0002213

    Increased membrane lipid unsaturation maintains membrane fluidity at low temperature.

    • DOI:10.37256/amtt.5220244537 Fatty acid desaturation maintains membrane fluidity, a broadly supported homeoviscous adaptation underpinning cold tolerance.
  • membrane fluidity enables cold tolerance RO:0002327

    Maintenance of membrane fluidity enables cold tolerance at the lower temperature bound.

    • DOI:10.37256/amtt.5220244537 Maintaining membrane fluidity at low temperature is a core mechanism supporting growth at the cold end of the range.
  • ambient temperature induces molecular chaperone systems

    Elevated ambient temperature induces molecular chaperone systems that support heat tolerance.

    • DOI:10.1007/s12275-023-00031-x Molecular chaperones DnaK/Hsp70 and GroEL are implicated in survival at high temperatures; broad across bacteria.
  • molecular chaperone systems enables heat tolerance RO:0002327

    Molecular chaperone systems enable heat tolerance at the upper temperature bound.

    • DOI:10.1007/s12275-023-00031-x Chaperone-mediated protein folding supports the upper-bound (Tmax) heat-tolerance mechanism.
  • compatible solutes protects against cold tolerance

    Compatible solutes protect against low-temperature and freezing stress, supporting cold tolerance.

    • DOI:10.37256/amtt.5220244537 Glycine, betaine, glycerol, and trehalose act as cryoprotectants and osmolytes; broad low-end mechanism.
  • membrane fluidity activates two-component cold sensing RO:0002213

    Changes in the liquid-crystalline membrane state activate two-component cold sensing.

    • DOI:10.1007/s42770-023-01057-4 Cold sensing via changes in the liquid-crystalline membrane state that activate two-component signal transduction; generic edge linking membrane state to regulatory response.

Provenance

Source
METPO (2025-11-25)
Definition source
DOI:10.1016/s0300-9629(97)00003-0

kg-microbe context

Matched 1 kg-microbe node via direct_metpo.

  • METPO:1000306 [-3.058, -0.353, -2.836, +1.133, …]

512-dim DeepWalkSkipGramEnsmallen embedding from kg-microbe (2026-04-25).

Nearest neighbors in embedding space

Top-8 cosine-similar METPO traits from the 2026-04-25 deepwalk (512-D).

Curation history

  1. · SEEDED_FROM_METPO · seed_from_metpo

    imported from data/raw/metpo.owl (CLASS)

  2. · CURATED_CAUSAL_GRAPH · claude

    Added DOI-backed causal graph linking cold- and heat-tolerance to the bounded temperature-range phenotype.

  3. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2007400×1).

  4. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2007500×1).

  5. · RENAME_PREDICATE_LABELS · claude

    Renamed 2 causal-edge predicate label(s) to align with existing groundings: sets → defines ×2.

  6. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2007500×2).

  7. · ENRICH_CAUSAL_GRAPH · claude

    Added 8 evidence-backed generic edges (6 new nodes) from the deep-research report.

  8. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 6 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002213×4, RO:0002327×2).

  9. · GROUND_CAUSAL_NODES · claude

    Grounded 2 causal-node grounding field(s) via mappings/node_grounding.tsv (METPO:1007505×1, CHEBI:25728×1).