temperature range mid3
METPO:1000452 · CLASS · REVIEWED
A temperature range phenotype in which the growth-supporting ambient temperature range spans approximately 30–34 °C, characteristic of mesophilic physiology.
Temperature-range-mid3 upper-mesophile range
Edge evidence
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upper-mesophile adaptation
enables
temperature range mid3
RO:0002327Upper-mesophile adaptation enables growth across 30–34 °C.
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DOI:10.1146/annurev-micro-091313-103612more unsaturated fatty acids
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temperature range mid3
is a
temperature range
rdfs:subClassOfTemperature range mid3 is a quantitative bin of the temperature-range phenotype.
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DOI:10.1016/s0300-9629(97)00003-0adapted to environments of high temperature
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membrane order / fluidity state
drives
DesK kinase-dominant state
Increased membrane order (reduced fluidity) drives DesK to a kinase-dominant state; membrane physical state is the proximate signal.
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DOI:10.1128/mmbr.00069-23
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DesK
phosphorylates
DesR
Core two-component signaling step linking membrane physical state to transcriptional response.
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DOI:10.1128/spectrum.03925-23
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phosphorylated DesR
activates transcription of
des (acyl-lipid desaturase)
DesR-P tetramerizes, binds the des promoter and induces lipid desaturation to restore membrane fluidity.
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DOI:10.1128/spectrum.03925-23
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des (acyl-lipid desaturase)
introduces double bonds into
membrane fatty acyl chains
Des-mediated unsaturation fluidizes the membrane and reduces bilayer thickness.
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DOI:10.1128/spectrum.03925-23
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temperature decrease
causes
membrane rigidification and increased thickness
biolink:causesGeneral physical trigger underlying homeoviscous adaptation across microbes.
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DOI:10.1007/s42770-023-01057-4
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homeoviscous adaptation
maintains
liquid-crystalline membrane state
Broad mechanism relevant to upper-mesophile growth: cells preserve membrane function across temperature fluctuations.
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DOI:10.1007/s42770-023-01057-4
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Provenance
- Source
- METPO (2025-11-25)
- Definition source
- DOI:10.1146/annurev-micro-091313-103612
Parent traits (1)
Synonyms (2)
- Mesophilie
- TR_30_to_34
kg-microbe context
Matched 1 kg-microbe node via direct_metpo.
METPO:1000452[-1.351, +1.368, -2.814, +2.551, …]
Nearest neighbors in embedding space
- environment temperature range mid4 0.935
- environment temperature range mid2 0.921
- environment temperature range mid1 0.834
- environment temperature range low 0.805
- environment pH range mid2 0.773
- environment pH range low 0.765
- environment pH range mid1 0.758
- environment temperature range high 0.724
Curation history
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SEEDED_FROM_METPO · seed_from_metpo
imported from data/raw/metpo.owl (CLASS)
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CURATED_CAUSAL_GRAPH · claude
Added DOI-backed definition and causal graph linking upper-mesophile adaptation to the temperature-range-mid3 bin.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002327×1, rdfs:subClassOf×1).
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ENRICH_CAUSAL_GRAPH · claude
Added 6 evidence-backed generic edges (11 new nodes) from the deep-research report.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (biolink:causes×1).
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GROUND_CAUSAL_NODES · claude
Grounded 2 causal-node grounding field(s) via mappings/node_grounding.tsv (UniProtKB:A0A067Z5N7×1, UniProtKB:A0A067Z2X2×1).