temperature range mid1

METPO:1000450 · CLASS · REVIEWED

A temperature range phenotype in which the growth-supporting ambient temperature range spans approximately 22–27 °C, characteristic of mesophilic physiology.

Temperature-range-mid1 lower-mesophile range

DOI-backed graph linking lower-mesophile adaptation to a temperature growth range of approximately 22–27 °C.

Temperature-range-mid1 lower-mesophile range Interactive directed graph showing evidence-backed causal relationships for temperature range mid1.

Edge evidence

  • lower-mesophile adaptation enables temperature range mid1 RO:0002327

    Lower-mesophile adaptation enables growth across 22–27 °C.

    • DOI:10.1146/annurev-micro-091313-103612 more unsaturated fatty acids Supports homoviscous mesophile adaptation as the lower-mesophile range mechanism.
  • temperature range mid1 is a temperature range rdfs:subClassOf

    Temperature range mid1 is a quantitative bin of the temperature-range phenotype.

    • DOI:10.1016/s0300-9629(97)00003-0 adapted to environments of high temperature Supports the 22–27 °C range as a value within the temperature-range distribution.
  • temperature decrease causes membrane rigidification/thickening biolink:causes

    Cooling reduces membrane fluidity and increases bilayer thickness, the initiating physical signal for adaptation.

    • DOI:10.1007/s42770-023-01057-4 Membrane rigidification and increased thickness act as the primary physical signal upon cooling.
  • fatty-acid desaturation increases membrane fluidity RO:0002213

    Double bonds disrupt tight acyl-chain packing, reversing cold-induced rigidification.

    • DOI:10.1128/spectrum.03925-23 Desaturation fluidizes the membrane and reduces thickness; strong and broadly conserved principle.
  • anteiso-branched fatty acids increases membrane fluidity RO:0002213

    Anteiso chains disorder lipids effectively, supporting growth at lower temperatures.

    • DOI:10.3390/cells12101353 Anteiso-BCFAs are more effective at fluidizing membranes than iso-BCFAs; generalizable across many Gram-positives.
  • branched-chain amino acids precursor for anteiso-branched fatty acids

    Branched-chain amino acids supply carbon skeletons for iso/anteiso-branched fatty acid synthesis.

    • DOI:10.1007/s42770-023-01057-4 Iso- and anteiso-branched FAs are derived from valine, leucine, and isoleucine precursors.
  • RNA thermometer melting exposes Shine-Dalgarno sequence exposure

    Temperature-dependent melting of RNA thermometers exposes the Shine-Dalgarno sequence to control translation.

    • DOI:10.1007/s12275-023-00031-x 5'-UTR cis-elements occlude or expose Shine-Dalgarno sequences to control translation; strong general mechanism.
  • temperature shift changes DNA supercoiling

    DNA topology functions as a thermosensor that globally reprograms transcription after temperature change.

    • DOI:10.1007/s12275-023-00031-x DNA topology acts as a thermosensor; cold stress enhances negative DNA supercoiling.

Provenance

Source
METPO (2025-11-25)
Definition source
DOI:10.1146/annurev-micro-091313-103612

Synonyms (2)

  • Mesophilie EXACT_SYNONYM · metpo.owl
  • TR_22_to_27 RELATED_SYNONYM · metpo.owl

kg-microbe context

Matched 1 kg-microbe node via direct_metpo.

  • METPO:1000450 [-1.575, -0.696, -2.370, +3.825, …]

512-dim DeepWalkSkipGramEnsmallen embedding from kg-microbe (2026-04-25).

Nearest neighbors in embedding space

Top-8 cosine-similar METPO traits from the 2026-04-25 deepwalk (512-D).

Curation history

  1. · SEEDED_FROM_METPO · seed_from_metpo

    imported from data/raw/metpo.owl (CLASS)

  2. · CURATED_CAUSAL_GRAPH · claude

    Added DOI-backed definition and causal graph linking lower-mesophile adaptation to the temperature-range-mid1 bin.

  3. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002327×1, rdfs:subClassOf×1).

  4. · ENRICH_CAUSAL_GRAPH · claude

    Added 6 evidence-backed generic edges (10 new nodes) from the deep-research report.

  5. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 3 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002213×2, biolink:causes×1).

  6. · GROUND_CAUSAL_NODES · claude

    Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (METPO:1007505×1).