cell length large

METPO:1000886 · CLASS · REVIEWED

A cell-length phenotype in which the longer cell dimension exceeds approximately 3 micrometers.

Large cell-length from fast growth or division delay

DOI-backed graph linking fast elongation, delayed FtsZ-ring constriction, or filamentous growth programs to large cell length (>3 μm).

Large cell-length from fast growth or division delay Interactive directed graph showing evidence-backed causal relationships for cell length large.

Edge evidence

  • fast elongation rate contributes to cell length large RO:0002326

    Fast elongation between divisions yields longer cells.

    • DOI:10.1126/science.aaa1313 cell size scales with growth rate Supports fast growth as a producer of larger cell sizes.
  • division-timing delay contributes to cell length large RO:0002326

    Delaying division allows continued elongation past the typical size.

    • DOI:10.1038/nrmicro2671 directs cell division Supports division timing as a control point for cell length.
  • cell length large is a cell length rdfs:subClassOf

    Large cell length is a quantitative bin of the cell-length phenotype.

    • DOI:10.1016/j.cub.2014.07.022 cell size is tightly controlled Supports large length as a value within the regulated cell-length distribution.
  • SOS response induces SulA-mediated division inhibition

    DNA damage/stress activates the SOS program, inducing division inhibitors that halt septation and promote elongation.

    • DOI:10.1101/2025.05.13.653778 SOS regulon upregulates sulA; SulA prevents Z-ring formation and halts division.
  • SulA inhibits assembly of FtsZ Z-ring

    SulA blocks FtsZ polymerization/assembly, delaying cytokinesis and allowing continued elongation.

    • DOI:10.1101/2025.05.13.653778 Canonical edge for many bacteria: SulA inhibits FtsZ assembly by sequestering monomers, directly blocking polymerization.
  • FtsZ delays onset of constriction

    FtsZ copy number is rate-limiting for division; reduced FtsZ delays septation and can increase cell length before division.

    • DOI:10.1038/s41467-024-54242-w FtsZ numbers are rate-limiting for cell division; ~20% downregulation may delay division.

Provenance

Source
METPO (2025-11-25)
Definition source
DOI:10.1126/science.aaa1313

Parent traits (1)

Synonyms (1)

  • L_>3 RELATED_SYNONYM · metpo.owl

kg-microbe context

Matched 1 kg-microbe node via direct_metpo.

  • METPO:1000886 [-0.375, -2.130, -2.643, +3.325, …]

512-dim DeepWalkSkipGramEnsmallen embedding from kg-microbe (2026-04-25).

Nearest neighbors in embedding space

Top-8 cosine-similar METPO traits from the 2026-04-25 deepwalk (512-D).

Curation history

  1. · SEEDED_FROM_METPO · seed_from_metpo

    imported from data/raw/metpo.owl (CLASS)

  2. · CURATED_CAUSAL_GRAPH · claude

    Added DOI-backed causal graph linking fast elongation and division-timing delay to large cell length (>3 μm).

  3. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 3 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002326×2, rdfs:subClassOf×1).

  4. · ENRICH_CAUSAL_GRAPH · claude

    Added 3 evidence-backed generic edges (6 new nodes) from the deep-research report.

  5. · GROUND_CAUSAL_NODES · claude

    Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (UniProtKB:C0LUM8×1).

  6. · GROUND_CAUSAL_NODES · claude

    Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (GO:0009432×1).

  7. · GROUND_CAUSAL_NODES · claude

    Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (UniProtKB:H8YHZ0×1).