copper tolerant
traitmech:000018 · CLASS · REVIEWED
A metal tolerance in which an organism grows in the presence of elevated copper (Cu2+/Cu+) concentrations, typically via the cue, cus, pco, and cop systems and ATPase-driven cytoplasmic copper efflux.
Copper tolerance via cop/cue/cus/pco efflux systems
Edge evidence
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copper(2+) ion
challenges
copper tolerant
METPO:2007406Elevated cytoplasmic copper is the toxic challenge the trait counters.
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DOI:10.3389/fmicb.2020.00047
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copper efflux systems (cue/cus/pco/cop)
enables
copper ion transmembrane transport
RO:0002327Cue/cus/pco/cop pumps drive ATPase-mediated copper export.
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DOI:10.1007/s10565-013-9262-1
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copper ion transmembrane transport
mitigates
copper(2+) ion
METPO:2007407Copper export depletes the cytoplasmic copper pool.
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DOI:10.1007/s10565-013-9262-1
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copper(2+) ion
causes
ROS-mediated oxidative damage
biolink:causesExcess intracellular copper drives Fenton-like reactions producing ROS that damage cellular macromolecules.
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DOI:10.3390/antibiotics12091474
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copper ion transmembrane transport
mitigates
ROS-mediated oxidative damage
METPO:2007407P1B-type ATPase copper efflux lowers cytoplasmic copper, reducing copper-driven oxidative toxicity.
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DOI:10.3390/antibiotics12091474
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periplasmic multicopper oxidase (CueO-type)
enables
Cu(I) to Cu(II) oxidation
RO:0002327CueO-type periplasmic multicopper oxidase catalyzes oxidation of Cu(I) to Cu(II) in the presence of oxygen.
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DOI:10.3390/antibiotics12091474
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Cu(I) to Cu(II) oxidation
mitigates
copper(2+) ion
METPO:2007407Oxidation of Cu(I) to less-toxic Cu(II) lowers the reactive copper burden in the periplasm.
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DOI:10.3390/antibiotics12091474
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Provenance
- Source
- METPO (2025-11-25)
- Definition source
- DOI:10.1007/s10565-013-9262-1
Parent traits (1)
Synonyms (1)
- copper resistant
kg-microbe context
Matched 1 kg-microbe node via parent_proxy.
METPO:1000059[-2.682, -2.070, -3.656, -0.652, …]
Nearest neighbors in embedding space
- environment cadmium tolerant 1.000
- morphology sulfur globule 1.000
- environment cobalt tolerant 1.000
- physiology quorum sensing 1.000
- environment desiccation tolerant 1.000
- environment piezophilic 1.000
- environment obligately piezophilic 1.000
- morphology gas vesicle 1.000
Curation history
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PROPOSED_FROM_RESEARCH · claude
Proposed candidate ENVIRONMENT trait (copper tolerance) from literature research; metal-specific sub-variant of metal tolerant.
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CURATED_CAUSAL_GRAPH · claude
Added evidence-backed causal graph (cop/cue/cus/pco copper efflux) with CHEBI/GO node groundings and RO/METPO predicate groundings; promoted PROPOSED to REVIEWED.
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ENRICH_CAUSAL_GRAPH · claude
Added 4 evidence-backed generic edges (3 new nodes) from the deep-research report.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 4 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2007407×2, biolink:causes×1, RO:0002327×1).