metal tolerant
traitmech:000012 · CLASS · REVIEWED
An environmental tolerance in which an organism grows in the presence of elevated concentrations of toxic heavy-metal or metalloid ions, typically via efflux-based resistance determinants (RND-family CBA pumps, P-type ATPases, and cation diffusion facilitators).
Metal tolerance via active efflux of heavy-metal ions
Edge evidence
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toxic heavy-metal ion
challenges
metal tolerant
METPO:2007406Elevated heavy-metal concentrations are the environmental challenge the trait counters.
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DOI:10.3389/fmicb.2020.00047
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metal efflux pump
enables
metal ion transmembrane export
RO:0002327CBA pumps, P-type ATPases, and CDFs export toxic metal cations from the cytoplasm.
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PMID:12829273
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metal ion transmembrane export
enables
metal tolerant
RO:0002327Cytoplasmic detoxification by export realizes the metal-tolerant phenotype.
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PMID:12829273
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ArsC arsenate reductase
converts
arsenate As(V)
ArsC arsenate reductase reduces As(V) to As(III) as the first detoxification step.
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DOI:10.52700/jmmg.v5i1.155
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arsenate As(V)
is converted to
arsenite As(III)
Arsenate is reduced to arsenite, the species handled by efflux pumps.
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DOI:10.52700/jmmg.v5i1.155
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ars operon
enables
arsenic tolerance
RO:0002327The arsC + arsB/acr3 ars operon mediates arsenate reduction and arsenite extrusion conferring arsenic tolerance.
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DOI:10.7717/peerj.18383
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arsenic tolerance
is a
metal tolerant
rdfs:subClassOfArsenic (metalloid) tolerance is a component of the broad metal-tolerant phenotype.
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DOI:10.52700/jmmg.v5i1.155
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metal efflux pump
mediates
metal tolerant
P-type ATPase, CDF, and RND efflux transporters mediate heavy-metal resistance in most bacteria.
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DOI:10.52700/jmmg.v5i1.155
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Provenance
- Source
- METPO (2025-11-25)
- Definition source
- PMID:12829273
Parent traits (1)
Children (6)
Synonyms (2)
- metallophilic
- heavy metal resistant
kg-microbe context
Matched 1 kg-microbe node via parent_proxy.
METPO:1000059[-2.682, -2.070, -3.656, -0.652, …]
Nearest neighbors in embedding space
- environment cadmium tolerant 1.000
- morphology sulfur globule 1.000
- environment cobalt tolerant 1.000
- environment copper tolerant 1.000
- environment desiccation tolerant 1.000
- environment piezophilic 1.000
- environment obligately piezophilic 1.000
- morphology gas vesicle 1.000
Curation history
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PROPOSED_FROM_RESEARCH · claude
Proposed candidate ENVIRONMENT trait (general heavy-metal/metalloid tolerance) from literature research to fill the metal-tolerance coverage gap. Parent of the metal-specific sub-variants.
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CURATED_CAUSAL_GRAPH · claude
Added evidence-backed causal graph (efflux-mediated metal detoxification) with GO node grounding and RO/METPO predicate groundings; promoted PROPOSED to REVIEWED.
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GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (UniProtKB:A0A067YD12×1).
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ENRICH_CAUSAL_GRAPH · claude
Added 5 evidence-backed generic edges (5 new nodes) from the deep-research report.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002327×1, rdfs:subClassOf×1).