arsenic tolerant

traitmech:000017 · CLASS · REVIEWED

A metalloid tolerance in which an organism grows in the presence of elevated arsenic (arsenite/arsenate) concentrations, typically via the ars operon, whose ArsB pump extrudes arsenite from the cytoplasm.

Arsenic tolerance via ars-operon arsenite efflux

Evidence-backed causal sketch linking the ars operon and ArsB pump to extrusion of cytoplasmic arsenite.

Arsenic tolerance via ars-operon arsenite efflux Interactive directed graph showing evidence-backed causal relationships for arsenic tolerant.

Edge evidence

  • arsenite(3-) challenges arsenic tolerant METPO:2007406

    Cytoplasmic arsenite is the toxic challenge the trait counters.

    • DOI:10.3389/fmicb.2020.00047 Cupriavidus metallidurans BS1 tolerates arsenite to a MIC of 3.5 mM.
  • ars operon (ArsB pump) enables arsenite transmembrane transport RO:0002327

    ArsB pumps arsenite out of the cytoplasm.

    • DOI:10.3389/fmicb.2018.02473 ArsB is an integral membrane protein extruding arsenite from the cell cytoplasm.
  • arsenite transmembrane transport mitigates arsenite(3-) METPO:2007407

    Active export depletes the cytoplasmic arsenite pool.

    • DOI:10.3389/fmicb.2018.02473 The ars operon is the near-ubiquitous arsenic-resistance determinant.
  • ArsR transcriptional repressor represses ars promoter

    ArsR represses ars-operon transcription in the absence of arsenite.

    • DOI:10.3390/antibiotics12091474 ArsR is a trans-acting transcriptional repressor that binds the ars promoter.
  • arsenite(3-) relieves repression by ArsR transcriptional repressor

    Arsenite binding changes ArsR conformation and de-represses ars transcription.

    • DOI:10.3389/fmicb.2024.1494872 Binding of As(III) to ArsR changes its conformation and relieves repression of the ars operon.
  • ArsC arsenate reductase enables arsenate reduction to arsenite RO:0002327

    ArsC reduces intracellular arsenate to arsenite.

    • DOI:10.3390/antibiotics12091474 ArsC is an arsenate reductase that converts intracellular As(V) to As(III).
  • arsenate reduction to arsenite produces arsenite(3-) METPO:2000202

    Arsenate reduction yields arsenite, the substrate for efflux.

    • DOI:10.3390/antibiotics12091474 ArsC converts intracellular As(V) to As(III), feeding the efflux route.
  • ArsB arsenite efflux permease enables arsenite transmembrane transport RO:0002327

    ArsB is an integral membrane pump extruding arsenite from the cytoplasm.

    • DOI:10.3390/antibiotics12091474 ArsB is an integral membrane arsenite efflux pump that extrudes As(OH)3/As3+ from the cytoplasm.
  • Acr3 arsenite efflux permease enables arsenite transmembrane transport RO:0002327

    Acr3 is an alternative inorganic arsenite efflux pump.

    • DOI:10.3390/microorganisms12010074 Some bacteria possess acr3, coding for an inorganic arsenite efflux pump.
  • ArsM arsenite S-adenosylmethionine methyltransferase enables arsenite methylation RO:0002327

    ArsM methylates arsenite to volatile methylated arsenicals.

    • DOI:10.7717/peerj.18383 arsM (arsenite S-adenosylmethionine methyltransferase) produces volatile methylated arsenicals.
  • arsenite methylation mitigates arsenite(3-) METPO:2007407

    Methylation and volatilization depletes the cytoplasmic arsenite pool, a detoxification route.

    • DOI:10.7717/peerj.18383 Produced arsenite is methylated by arsM to volatile methylated arsenic, removing it from the cell.
  • ArsC arsenate reductase reduces arsenate(3-) METPO:2000017

    Arsenate reductase reduces arsenate to arsenite, the form handled by efflux pumps.

    • DOI:10.3389/fmicb.2020.00047 Connecting edge wiring the enrichment node into the graph.

Provenance

Source
METPO (2025-11-25)
Definition source
DOI:10.3389/fmicb.2018.02473

Synonyms (1)

  • arsenic resistant RELATED_SYNONYM · DOI:10.3389/fmicb.2018.02473

kg-microbe context

Matched 1 kg-microbe node via parent_proxy.

  • METPO:1000059 [-2.682, -2.070, -3.656, -0.652, …]

512-dim DeepWalkSkipGramEnsmallen embedding from kg-microbe (2026-04-25).

Nearest neighbors in embedding space

Top-8 cosine-similar METPO traits from the 2026-04-25 deepwalk (512-D).

Curation history

  1. · PROPOSED_FROM_RESEARCH · claude

    Proposed candidate ENVIRONMENT trait (arsenic/metalloid tolerance) from literature research; sub-variant of metal tolerant.

  2. · CURATED_CAUSAL_GRAPH · claude

    Added evidence-backed causal graph (ars-operon arsenite efflux) with CHEBI/GO node groundings and RO/METPO predicate groundings; promoted PROPOSED to REVIEWED.

  3. · ENRICH_CAUSAL_GRAPH · claude

    Added 8 evidence-backed generic edges (9 new nodes) from the deep-research report.

  4. · FIX_ORPHAN_NODE · claude

    Connected orphaned node 'arsenate' via arsC_reductase -[reduces]-> arsenate.

  5. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 7 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002327×4, METPO:2000202×1, METPO:2007407×1, METPO:2000017×1).

  6. · GROUND_CAUSAL_NODES · claude

    Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (CHEBI:29125×1).