cadmium tolerant

traitmech:000013 · CLASS · REVIEWED

A metal tolerance in which an organism grows in the presence of elevated cadmium (Cd2+) concentrations, typically via cation-efflux resistance systems such as the czc determinant.

Cadmium tolerance via czc cation-efflux system

Evidence-backed causal sketch linking the cobalt-zinc-cadmium (czc) efflux determinant to cytoplasmic cadmium detoxification.

Cadmium tolerance via czc cation-efflux system Interactive directed graph showing evidence-backed causal relationships for cadmium tolerant.

Edge evidence

  • cadmium(2+) ion challenges cadmium tolerant METPO:2007406

    Cytoplasmic cadmium is the toxic challenge the trait counters.

    • DOI:10.3389/fmicb.2020.00047 Cupriavidus metallidurans BS1 tolerates Cd(2+) to a MIC of 2.5 mM.
  • czc cation-efflux system enables cadmium ion transmembrane transport RO:0002327

    CzcP exports cadmium together with zinc and cobalt cations.

    • DOI:10.1111/j.1365-2958.2009.06792.x CzcP exports transition metals Zn(2+), Cd(2+), and Co(2+).
  • cadmium ion transmembrane transport mitigates cadmium(2+) ion METPO:2007407

    Czc-mediated export depletes the cytoplasmic cadmium pool.

    • DOI:10.1111/j.1365-2958.2009.06792.x The czc efflux system of C. metallidurans confers cadmium resistance.
  • metallothionein / thiol-rich metal-binding proteins enables cadmium ion sequestration RO:0002327

    Thiol-rich metallothioneins bind and sequester cytoplasmic Cd(2+).

    • DOI:10.1007/s40201-023-00887-6 Metallothioneins bind Cd(II); thiol-rich proteins mediate cadmium sequestration as a microbial resistance mechanism.
  • cadmium ion sequestration mitigates cadmium(2+) ion METPO:2007407

    Sequestration of cadmium lowers the free toxic cytoplasmic Cd(2+) pool.

    • DOI:10.1007/s40201-023-00887-6 Metallothionein/thiol-rich sequestration removes free cytoplasmic Cd(II) as a detoxification mechanism.
  • CadA P-type (P1B) ATPase enables cadmium ion transmembrane transport RO:0002327

    CadA P1B-type ATPase uses ATP to pump Cd(II) from cytoplasm to periplasm.

    • DOI:10.1007/s40201-023-00887-6 P-type (P1B) ATPases (CadA) use ATP to pump Cd(II) from cytoplasm to periplasm.
  • zinc(2+) ion induces czc cation-efflux system

    Zinc cross-induces expression of the czc cation-efflux cadmium-resistance program.

    • DOI:10.1007/s40201-023-00887-6 czc expression is induced by zinc; zinc exposure enhances cadmium resistance via the efflux program.

Provenance

Source
METPO (2025-11-25)
Definition source
PMID:12829273

kg-microbe context

Matched 1 kg-microbe node via parent_proxy.

  • METPO:1000059 [-2.682, -2.070, -3.656, -0.652, …]

512-dim DeepWalkSkipGramEnsmallen embedding from kg-microbe (2026-04-25).

Nearest neighbors in embedding space

Top-8 cosine-similar METPO traits from the 2026-04-25 deepwalk (512-D).

Curation history

  1. · PROPOSED_FROM_RESEARCH · claude

    Proposed candidate ENVIRONMENT trait (cadmium tolerance) from literature research; metal-specific sub-variant of metal tolerant.

  2. · CURATED_CAUSAL_GRAPH · claude

    Added evidence-backed causal graph (czc cadmium efflux) with CHEBI/GO node groundings and RO/METPO predicate groundings; promoted PROPOSED to REVIEWED.

  3. · GROUND_CAUSAL_NODES · claude

    Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (UniProtKB:B0VPE1×1).

  4. · ENRICH_CAUSAL_GRAPH · claude

    Added 4 evidence-backed generic edges (4 new nodes) from the deep-research report.

  5. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 3 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002327×2, METPO:2007407×1).

  6. · GROUND_CAUSAL_NODES · claude

    Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (CHEBI:29105×1).