unequal protein aggregate inheritance at cell division
traitmech:000711 · CLASS · PROPOSED
A physiological phenotype in which microbial cell division recurrently yields sibling cells with unequal numbers or amounts of inherited protein aggregates.
Trait evidence
-
DOI:10.1073/pnas.0708931105their position in the mother cell determines which offspring inherits the inclusion body and where it will be located within it
-
DOI:10.1371/journal.pbio.1001886We experimentally confirmed that fusion increases segregation asymmetry, for a range of stresses, and identified Hsp16 as a fusion factor.
-
DOI:10.1111/mmi.14228Noticeably, stalked cells always inherited more aggregates (75%) than swarmer cells (25%).
-
DOI:10.1371/journal.pbio.2003853the polarly deposited PA was subjected to limited disaggregation and therefore became asymmetrically inherited for a large number of generations
Provenance
- Identifier source
- TraitMech local identifier
- Definition source
DOI:10.1371/journal.pbio.1001886
Parent traits (1)
kg-microbe context
No kg-microbe node embedding matched this record in the 2026-04-25 deepwalk.
Discussions and Knowledge Gaps
Assess the quantity-qualified definition and the level of inheritance evidence.
Require repeated lineage or population observations under stated conditions, not a single unequal sibling pair. Retain aggregate count versus fluorescence-derived amount, the time of measurement, reporter, strain and detection limits. Amount is not concentration; cell area is not volume. Within-pair inequality, cell-type allocation bias and complete aggregate exclusion are distinct readouts. Sharing between daughters need not be equal, and unequal inheritance need not favor a fixed pole or cell type. No universal threshold or programmed asymmetry is specified. Bare asymmetric segregation has narrower source usages and is not asserted as an exact synonym. Aggregate presence, aggrephagy, heat-shock response, morphological division asymmetry, replicative aging and functional rejuvenation are not equivalent traits or demonstrated narrower parents. Use METPO:1000059 phenotype without reparenting existing records.
Resolve assay discrepancies, strain provenance and mechanisms before extending this first-pass record.
This phenotype does not imply active transport, toxic damage, functional decline or rejuvenation. An aggregate-free descendant alone establishes none of those mechanisms or outcomes. The engineered reporter and deletion contexts remain qualified evidence, not natural canonical examples. No shared protein mechanism, graph or external equivalence is asserted. Coelho Figure 4 panel-label and Figure 3C versus Methods temperature discrepancies remain open; actual plotted endpoints are distinguished from text pointers. Primary source/metadata notice checks on 2026-10-12 were bounded by access; they do not prove exhaustive notice absence. Reporter-focus inheritance must be separated from endogenous aggregation: the later Govers study identifies IbpA-YFP label-induced clustering, while its separate post-heat-shock IbpA-msfGFP lineages support inheritance. Monomeric labels also require validation of expression level and assay conditions; no reporter is declared universally artifact-free.
Retain the deprecated aggregate lexical hit without asserting identity or reusing its ID.
Pinned and current released METPO contain METPO:1000011, obsolete aggregate, marked deprecated and below ObsoleteClass. It has an IAO:0000231 annotation to OMO:0001000, but no definition, replacement or consider annotation in the inspected releases. Its original scope and reason-code interpretation remain unresolved. A lexical aggregate hit does not establish equivalence to unequal protein aggregate inheritance; this literature-defined phenotype was independently accepted. Do not reactivate 1000011 or include it as an exact xref. Ignored/hidden available-file and registered historical-tree searches, pending PRs and released RDF found no exact trait in the inspected scope; this is not discovery exhaustion.
Curation history
-
·
MINTED_TRAITMECH_ID · codex
Added unequal protein aggregate inheritance at cell division with three primary DOI references and checked snippets. Retained quantity, population, assay and historical-METPO scope limits. Reserved 000711, v587 and 1066400-1066499 after ignored/hidden, registered historical-tree and pending-PR checks, distinguishing an editor namespace envelope from narrower reservations. Examples and mechanism graph deferred. Existing records unchanged; timestamp is the observed UTC curation decision.
-
·
QUALIFIED_REPORTER_EVIDENCE · codex
Addressed issue #1896 by qualifying the Lindner reporter-focus readout against later primary evidence of IbpA-YFP label-induced clustering. Added Govers 2018 with a checked abstract snippet and separate post-stress inheritance context. Preserved identity, definition, parent, PROPOSED status, original event and source assessment; appended the correction and updated the proposal sources. Timestamp is the observed UTC correction decision.
Recorded curation sessions
-
· codex
- CREATE — Add unequal protein aggregate inheritance at cell division
Minted traitmech:000711 as PROPOSED with three primary DOI citations and directly checked snippets; reserved v587 and METPO:1066400-1066499 after scoped local, historical and pending-source checks. Preserved count/amount versus concentration, shared versus equal inheritance, population versus pair readouts, source discrepancies and deprecated METPO lexical-hit limits. No existing records, canonical taxa, exact xrefs or mechanism graphs changed. Guarded validated writer dry run and apply succeeded; 21 focused writer tests passed. Broader gates and review follow separately.
- CREATE — Add unequal protein aggregate inheritance at cell division
-
· codex
- EDIT — Qualify aggregate-inheritance reporter evidence
Corrected the older IbpA-YFP evidence interpretation against Govers 2018, DOI:10.1371/journal.pbio.2003853. Retained the historical snippet as reporter-focus evidence, added a checked scientific-abstract snippet and separate post-stress IbpA-msfGFP inheritance context, and preserved definition, identity, PROPOSED status and original event. Primary Results, relevant Methods and actual Figures 1 and 3 were inspected. The source sidecar appends a correction to its historical assessment; the proposal sources and skill are updated. The guarded correction and 32 focused tests passed before application. Further native validation and linked review outcomes are recorded separately. This succeeds history/records/unequal_protein_aggregate_inheritance/2026-10-12T144228Z-codex-c658f7.yaml without rewriting it.
- EDIT — Qualify aggregate-inheritance reporter evidence