moderately halophilic
METPO:1000623 · CLASS · REVIEWED
A halophily preference where growth and proliferation requires high levels of sodium chloride, usually above or about 0.2 M.
Moderate halophile compatible-solute mechanism
Edge evidence
-
elevated NaCl
causes
osmotic stress
biolink:causesModerate NaCl elevation imposes osmotic stress that must be balanced for growth.
-
DOI:10.1371/journal.pone.0168818cope with high salinities
-
-
ectoine
mitigates
osmotic stress
METPO:2007407Ectoine accumulation helps cells maintain osmotic balance at moderate salinity.
-
DOI:10.1371/journal.pone.0168818synthesizes ectoine as its major compatible solute
-
-
glycine betaine
mitigates
osmotic stress
METPO:2007407Glycine betaine uptake can contribute to bacterial osmoprotection.
-
DOI:10.1093/femsre/fuy009glycine betaine uptake
-
-
ectoine
enables
moderately halophilic
RO:0002327Compatible-solute accumulation supports growth at elevated NaCl.
-
DOI:10.1371/journal.pone.0168818allows microorganisms to cope with high salinities
-
-
elevated NaCl
selects for
moderately halophilic
METPO:2007401Moderate halophiles grow best under elevated salinity.
-
DOI:10.1093/femsre/fuy009Moderately halophilic bacteria
-
-
osmotic stress
induces
compatible solute accumulation
Osmotic stress under elevated NaCl induces accumulation of organic compatible solutes.
-
DOI:10.1128/mmbr.62.2.504-544.1998
-
-
EctD (ectoine hydroxylase)
converts
hydroxyectoine
Ectoine hydroxylase EctD converts ectoine to hydroxyectoine, a generic ectoine-pathway step across halophiles.
-
DOI:10.1186/s12934-021-01567-6
-
-
BCCT transporters
imports
glycine betaine
METPO:2000208BCCT-family carriers (BetT, BetP, OpuD) import compatible solutes such as glycine betaine.
-
DOI:10.58088/07hg-r941
-
-
TeaABC TRAP transporter
imports
hydroxyectoine
METPO:2000208TeaABC TRAP transporter imports ectoine and hydroxyectoine for osmoadaptation.
-
DOI:10.58088/07hg-r941
-
-
TeaABC TRAP transporter
imports
ectoine
METPO:2000208TeaABC TRAP transporter imports ectoine for osmoadaptation.
-
DOI:10.58088/07hg-r941
-
-
salt-out (compatible-solute) strategy
predominates in
moderately halophilic
The salt-out / compatible-solute strategy predominates among moderate halophiles.
-
DOI:10.3389/frmbi.2023.1329925
-
Provenance
- Source
- METPO (2025-11-25)
- Author
- Anthea Guo
- Definition source
- PMID:9758852
Parent traits (1)
Synonyms (1)
- moderate-halophilic
kg-microbe context
Matched 1 kg-microbe node via direct_metpo.
METPO:1000623[-94.883, -13.167, +11.221, +70.341, …]
Nearest neighbors in embedding space
- morphology square shaped 0.300
- environment halophily preference 0.288
- morphology vibrio shaped 0.281
- environment euryhaline 0.262
- environment haloalkaliphilic 0.260
- morphology swarming motility 0.251
- morphology twitching motility 0.251
- morphology motile 0.251
Curation history
-
·
SEEDED_FROM_METPO · seed_from_metpo
imported from data/raw/metpo.owl (CLASS)
-
·
CURATED_WITH_ORGANISM_EXAMPLE · codex
Added Halomonas elongata organism example with PMID-backed evidence.
-
·
ADDED_CAUSAL_GRAPH · codex
Added DOI-backed causal graph for moderate halophile compatible-solute osmoadaptation.
-
·
GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002327×1).
-
·
GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (biolink:causes×1).
-
·
GROUND_CAUSAL_PREDICATES · claude
Grounded 3 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2007407×2, METPO:2007401×1).
-
·
GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (GO:0006970×1).
-
·
REMOVE_REDUNDANT_SYNONYM · claude
Removed 1 synonym(s) whose text duplicated the label (seeder redundancy; no information lost).
-
·
ENRICH_CAUSAL_GRAPH · claude
Added 6 evidence-backed generic edges (6 new nodes) from the deep-research report.
-
·
GROUND_CAUSAL_PREDICATES · claude
Grounded 3 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2000208×3).
-
·
GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (CHEBI:49432×1).