square shaped
METPO:1000694 · CLASS · REVIEWED
A cell shape in which an organism forms flat, square or rectangular cells.
Square-shape planar anisotropic envelope growth
Edge evidence
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planar envelope growth
enables
right-angle growth geometry
RO:0002327Planar envelope growth in two axes supports rectangular geometry.
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DOI:10.1099/ijs.0.65431-0flat square or disc-shaped cells
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S-layer constraints
causes
right-angle growth geometry
biolink:causesThe paracrystalline S-layer constrains envelope geometry toward right angles.
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DOI:10.1146/annurev-cellbio-101011-155745cell shape is genetically determined
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right-angle growth geometry
manifests as
square shaped
METPO:2007400Right-angle planar geometry manifests the square-shaped trait.
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DOI:10.1099/ijs.0.65431-0square or disc-shaped cells
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archaeal S-layer
defines
cell shape
METPO:2007500The archaeal S-layer is a primary structural determinant of cell shape.
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DOI:10.1038/s41564-022-01215-8
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archaeal S-layer
provides
mechanical stability
The archaeal S-layer provides mechanical stability to the cell envelope.
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DOI:10.1038/s41564-022-01215-8
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cytoskeletal control of local growth and division axis
gives rise to
square shaped
Precise cytoskeleton- and S-layer-guided control of local growth and division axis gives rise to flat geometric (square/triangular) archaeal shapes.
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DOI:10.1038/s41564-022-01215-8
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S-layer proteins
causes when lost
cell shape and size defect
Loss of S-layer proteins causes profound defects in cell shape and size, evidencing the S-layer causal role in archaeal morphology.
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DOI:10.1038/s41564-022-01215-8
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Provenance
- Source
- METPO (2025-11-25)
- Definition source
- DOI:10.1099/ijs.0.65431-0
Parent traits (1)
Synonyms (1)
- square
kg-microbe context
Matched 1 kg-microbe node via direct_metpo.
METPO:1000694[-3.745, -0.587, -2.659, +0.960, …]
Nearest neighbors in embedding space
- morphology crescent shaped 0.670
- morphology sarcina arrangement 0.659
- morphology tetrad arrangement 0.659
- morphology cell shape 0.659
- morphology staphylococcus arrangement 0.659
- morphology streptococcus arrangement 0.659
- morphology spindle shaped 0.654
- morphology triangular shaped 0.653
Curation history
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·
SEEDED_FROM_METPO · seed_from_metpo
imported from data/raw/metpo.owl (CLASS)
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CURATED_CAUSAL_GRAPH · claude
Added DOI-backed definition and causal graph linking planar anisotropic envelope growth and S-layer constraints to square-shaped halophile morphology.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002327×1).
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·
GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2007400×1).
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·
RENAME_PREDICATE_LABELS · claude
Renamed 1 causal-edge predicate label(s) to align with existing groundings: shapes → causes ×1.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (biolink:causes×1).
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ENRICH_CAUSAL_GRAPH · claude
Added 4 evidence-backed generic edges (6 new nodes) from the deep-research report.
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·
GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2007500×1).