sarcina arrangement
traitmech:000120 · CLASS · REVIEWED
A cell arrangement in which cocci divide in three perpendicular planes and remain attached as cubic packets of eight (sarcinae).
Sarcina arrangement via three-plane perpendicular division
Edge evidence
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three perpendicular division planes
causes
sarcina arrangement
biolink:causesThree perpendicular division planes with incomplete separation yield cubic eight-cell packets.
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DOI:10.1038/ncomms4842
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cell division
enables
sarcina arrangement
RO:0002327Bacterial cell division underlies sarcina packet formation.
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DOI:10.1128/MMBR.00001-06
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FtsZ
polymerizes to form
Z ring
FtsZ polymerizes to form the dynamic Z ring at the division site.
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DOI:10.1002/mbo3.1338
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FtsA
attaches
Z ring
FtsA tethers the Z ring to the cytoplasmic membrane for proper divisome assembly.
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DOI:10.1002/mbo3.1338
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FtsA
attaches Z ring to
cytoplasmic membrane
FtsA attaches the Z ring to the cytoplasmic membrane.
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DOI:10.1002/mbo3.1338
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peptidoglycan synthetases and hydrolases
cooperate in
septal peptidoglycan remodeling
PG synthetases and hydrolases work together to build the septal cross-wall.
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DOI:10.1002/mbo3.1338
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cell wall synthesis at division site
drives
division septum formation
FtsZ-dependent cell wall synthesis at the division site drives septum formation.
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DOI:10.1111/j.1574-6976.2007.00098.x
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peptidoglycan hydrolases
degrade
peripheral peptidoglycan bridge
Peptidoglycan hydrolases degrade the peripheral PG bridge connecting daughter cells.
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DOI:10.1002/mbo3.1338
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peripheral peptidoglycan bridge
degradation triggers
daughter-cell separation
Degradation of the peripheral PG bridge triggers daughter-cell splitting; incomplete separation retains packets.
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DOI:10.1002/mbo3.1338
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Provenance
- Source
- METPO (2025-11-25)
- Definition source
- DOI:10.1128/MMBR.00001-06
Parent traits (1)
Synonyms (1)
- cubic packet cocci
kg-microbe context
Matched 1 kg-microbe node via parent_proxy.
METPO:1000666[-5.052, -3.981, -3.909, -0.718, …]
Nearest neighbors in embedding space
- morphology tetrad arrangement 1.000
- morphology staphylococcus arrangement 1.000
- morphology streptococcus arrangement 1.000
- morphology cell shape 1.000
- morphology crescent shaped 0.955
- morphology diplococcus shaped 0.905
- morphology dumbbell shaped 0.888
- morphology triangular shaped 0.877
Curation history
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PROPOSED_FROM_RESEARCH · claude
Proposed candidate MORPHOLOGY trait (sarcina / cubic-packet arrangement); leftover round, cell-arrangement sibling of diplococcus shaped.
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CURATED_CAUSAL_GRAPH · claude
Added evidence-backed causal graph (three-plane perpendicular division → cubic packet) with GO node grounding and RO/biolink predicate groundings; promoted PROPOSED to REVIEWED.
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ENRICH_CAUSAL_GRAPH · claude
Added 7 evidence-backed generic edges (11 new nodes) from the deep-research report.
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GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (UniProtKB:C0LUM8×1).
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GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (GO:0000917×1).
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GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (UniProtKB:A0A1M6DY20×1).