NaCl optimum high
METPO:1000468 · CLASS · REVIEWED
A NaCl optimum phenotype with the best-growth NaCl concentration above approximately 8% (w/v), corresponding to extreme-halophile physiology.
NaCl-optimum-high extreme-halophile setpoint
Edge evidence
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hypersaline NaCl
selects for
salt-in strategy
METPO:2007401Hypersaline conditions select for intracellular ion-accumulation osmoadaptation.
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DOI:10.1186/1746-1448-4-2KCl accumulating Halobacterium salinarum
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salt-in strategy
produces
NaCl optimum high
METPO:2000202Salt-in ion accumulation yields a >8% NaCl-optimum setpoint.
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DOI:10.1093/femsre/fuy009extreme halophile
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NaCl optimum high
is a
NaCl optimum
rdfs:subClassOfNaCl optimum high is a quantitative bin of the NaCl-optimum phenotype.
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DOI:10.1093/femsre/fuy009optimal NaCl
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salt-in strategy
increases
intracellular KCl concentration
RO:0002213Salt-in osmoadaptation accumulates high intracellular KCl.
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DOI:10.1002/pro.5003
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salt-in strategy
requires
potassium uptake system
Salt-in strategy depends on K+ uptake systems to accumulate cytoplasmic potassium.
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DOI:10.1002/pro.5003
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Na+/H+ antiporter
supports
salt-in strategy
Na+/H+ antiporter activity supports salt-in osmoadaptation via Na+ exclusion.
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DOI:10.3390/microorganisms12081738
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intracellular KCl concentration
selects for
acidic proteome
METPO:2007401High intracellular KCl selects for an acidic proteome.
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DOI:10.1038/s41559-024-02505-6
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acidic proteome
enables
protein function at high salinity
RO:0002327Acidic proteome enables protein function at high salinity.
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DOI:10.1038/s41559-024-02505-6
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increased acidic amino-acid content
increases
protein solubility in high salt
RO:0002213Increased acidic amino-acid content increases protein solubility in high salt.
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DOI:10.1002/pro.5003
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Provenance
- Source
- METPO (2025-11-25)
- Definition source
- DOI:10.1093/femsre/fuy009
Parent traits (1)
Synonyms (2)
- Extreme halophile
- NaO_>8
kg-microbe context
Matched 1 kg-microbe node via direct_metpo.
METPO:1000468[-2.565, -2.720, +0.941, +0.988, …]
Nearest neighbors in embedding space
- environment NaCl optimum 0.606
- environment NaCl range high 0.570
- environment NaCl delta high 0.564
- environment salinity phenotype with numerical limits 0.544
- environment optimum phenotype with numerical limits 0.529
- environment NaCl range 0.507
- environment pH optimum 0.486
- environment NaCl delta 0.467
Curation history
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·
SEEDED_FROM_METPO · seed_from_metpo
imported from data/raw/metpo.owl (CLASS)
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·
CURATED_CAUSAL_GRAPH · claude
Added DOI-backed definition and causal graph linking salt-in ion-accumulation strategy under hypersaline NaCl to the extreme-halophile NaCl-optimum bin.
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·
GROUND_CAUSAL_PREDICATES · claude
Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2000202×1, rdfs:subClassOf×1).
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·
GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2007401×1).
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·
GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (METPO:1007720×1).
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·
ENRICH_CAUSAL_GRAPH · claude
Added 6 evidence-backed generic edges (7 new nodes) from the deep-research report.
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·
GROUND_CAUSAL_PREDICATES · claude
Grounded 4 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002213×2, METPO:2007401×1, RO:0002327×1).
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·
GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (UniProtKB:A0A068T423×1).