NaCl range high

METPO:1000472 · CLASS · REVIEWED

A NaCl range phenotype in which the growth-supporting NaCl range extends above approximately 8% (w/v), characteristic of extreme-halophile organisms.

NaCl-range-high extreme-halophile range

DOI-backed graph linking salt-in physiology to NaCl growth ranges extending above 8% (w/v).

NaCl-range-high extreme-halophile range Interactive directed graph showing evidence-backed causal relationships for NaCl range high.

Edge evidence

  • salt-in physiology produces NaCl range high METPO:2000202

    Salt-in physiology yields a growth range extending above 8% NaCl.

    • DOI:10.1186/1746-1448-4-2 KCl accumulating Halobacterium salinarum Supports salt-in physiology as the basis of extreme-halophile growth ranges.
  • NaCl range high is a NaCl range rdfs:subClassOf

    NaCl range high is a quantitative bin of the NaCl-range phenotype.

    • DOI:10.1093/femsre/fuy009 salinity range Supports the >8% range as a value within the NaCl-range distribution.
  • high external NaCl / hypersaline brine induces intracellular K+

    High external NaCl induces molar intracellular K+ accumulation (salt-in strategy).

    • DOI:10.1038/s41559-024-02505-6 Canonical salt-in strategy accumulates molar cytoplasmic K+ (up to 4M) in hypersaline systems.
  • salt-in physiology results in acidic proteome

    Salt-in physiology drives proteome acidification via enrichment in acidic amino acids.

    • DOI:10.1038/s41559-024-02505-6 K+ accumulation accompanied by proteome acidification through Glu/Asp enrichment.
  • acidic amino acid enrichment (Asp/Glu) contributes to protein function at very high ionic strength RO:0002326

    Asp/Glu enrichment produces negatively charged surfaces enabling protein function at high ionic strength.

    • DOI:10.1093/femsre/fuy026 Salt-in proteins more hydrophilic and enriched in acidic residues, enabling functionality at very high ionic strength.
  • salt-in physiology depends on intracellular K+ RO:0002502

    Salt-in extreme-halophile physiology depends on high intracellular K+ (proteins misfold below ~2.2 M).

    • DOI:10.1093/femsre/fuy026 Cellular vitality of salt-in organisms dependent on high intracellular K+; proteins misfold when K+ falls below ~2.2 M.
  • intracellular compatible solutes stabilizes protein stabilization under salt stress

    Intracellular compatible solutes stabilize proteins/enzymes under salt stress.

    • DOI:10.1007/978-3-030-18975-4_4 Osmolytes act as protein stabilizers/chaperones under salt stress.

Provenance

Source
METPO (2025-11-25)
Definition source
DOI:10.1093/femsre/fuy009

Parent traits (1)

Synonyms (2)

  • Extreme halophile EXACT_SYNONYM · metpo.owl
  • NaR_>8 RELATED_SYNONYM · metpo.owl

kg-microbe context

Matched 1 kg-microbe node via direct_metpo.

  • METPO:1000472 [+0.219, -2.224, +0.350, +2.763, …]

512-dim DeepWalkSkipGramEnsmallen embedding from kg-microbe (2026-04-25).

Nearest neighbors in embedding space

Top-8 cosine-similar METPO traits from the 2026-04-25 deepwalk (512-D).

Curation history

  1. · SEEDED_FROM_METPO · seed_from_metpo

    imported from data/raw/metpo.owl (CLASS)

  2. · CURATED_CAUSAL_GRAPH · claude

    Added DOI-backed definition and causal graph linking salt-in physiology to the extreme-halophile NaCl-range bin.

  3. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2000202×1, rdfs:subClassOf×1).

  4. · ENRICH_CAUSAL_GRAPH · claude

    Added 5 evidence-backed generic edges (7 new nodes) from the deep-research report.

  5. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002326×1, RO:0002502×1).