NaCl range mid2
METPO:1000471 · CLASS · REVIEWED
A NaCl range phenotype in which the growth-supporting NaCl range spans approximately 3–8% (w/v), characteristic of moderate-halophile organisms.
NaCl-range-mid2 moderate-halophile range
Edge evidence
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robust osmoadaptive tolerance
produces
NaCl range mid2
METPO:2000202Robust osmoadaptive tolerance yields a 3–8% NaCl growth range.
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DOI:10.1093/femsre/fuy009moderate halophile
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NaCl range mid2
is a
NaCl range
rdfs:subClassOfNaCl range mid2 is a quantitative bin of the NaCl-range phenotype.
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DOI:10.1093/femsre/fuy009salinity range
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ectABC operon
enables biosynthesis of
ectoine
The ectABC operon encodes the conserved ectoine biosynthesis pathway.
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DOI:10.3389/fmicb.2023.1192059
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ectoine
positively contributes to
NaCl range mid2
Ectoine accumulation supports sustained growth/tolerance at 6-8% NaCl.
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DOI:10.1186/s12934-024-02358-5
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Na+ and K+ ion uptake
rapidly balances
osmotic pressure balance
Uptake of Na+ and K+ ions rapidly balances osmotic pressure after NaCl upshift.
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DOI:10.1186/s12934-024-02358-5
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osmotic pressure balance
contributes to
robust osmoadaptive tolerance
RO:0002326Balancing osmotic pressure underpins robust osmoadaptive tolerance.
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DOI:10.1186/s12934-024-02358-5
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intracellular glutamate/glutamine pools
provides early osmotic buffering for
robust osmoadaptive tolerance
Increased glutamate/glutamine pools provide early osmotic buffering during NaCl shock.
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DOI:10.1186/s12934-024-02358-5
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BetA/BetB pathway
enables biosynthesis of
glycine betaine
BetA and BetB convert choline to glycine betaine, a compatible solute.
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DOI:10.3389/fmicb.2023.1192059
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glycine betaine
positively contributes to
robust osmoadaptive tolerance
Glycine betaine acts as a compatible solute supporting osmoadaptive tolerance.
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DOI:10.3389/fmicb.2023.1192059
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Provenance
- Source
- METPO (2025-11-25)
- Definition source
- DOI:10.1093/femsre/fuy009
Parent traits (1)
Synonyms (3)
- Halotolerant
- Moderate halophile
- NaR_3_to_8
kg-microbe context
Matched 1 kg-microbe node via direct_metpo.
METPO:1000471[-2.730, -1.359, +0.847, +2.066, …]
Nearest neighbors in embedding space
- environment NaCl delta mid2 0.887
- environment NaCl range mid1 0.871
- environment NaCl range low 0.844
- environment NaCl optimum mid1 0.688
- environment pH range mid2 0.675
- environment pH range mid3 0.670
- environment pH range mid1 0.665
- environment temperature optimum mid2 0.661
Curation history
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·
SEEDED_FROM_METPO · seed_from_metpo
imported from data/raw/metpo.owl (CLASS)
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CURATED_CAUSAL_GRAPH · claude
Added DOI-backed definition and causal graph linking robust osmoadaptive tolerance to the moderate-halophile NaCl-range bin.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2000202×1, rdfs:subClassOf×1).
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·
ENRICH_CAUSAL_GRAPH · claude
Added 7 evidence-backed generic edges (7 new nodes) from the deep-research report.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002326×1).
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GROUND_CAUSAL_NODES · claude
Grounded 2 causal-node grounding field(s) via mappings/node_grounding.tsv (CHEBI:27592×1, CHEBI:17750×1).