NaCl optimum low
METPO:1000465 · CLASS · REVIEWED
A NaCl optimum phenotype with the best-growth NaCl concentration at or below approximately 1% (w/v), corresponding to non-halophilic or halotolerant physiology.
NaCl-optimum-low non-halophile setpoint
Edge evidence
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low ambient NaCl
imposes
minimal osmoadaptive load
Low ambient NaCl imposes minimal osmoadaptive demand on the cell.
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DOI:10.1093/femsre/fuy009optimal NaCl
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minimal osmoadaptive load
produces
NaCl optimum low
METPO:2000202Minimal osmoadaptive demand yields a low NaCl-optimum setpoint.
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DOI:10.1093/femsre/fuy009optimal NaCl
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NaCl optimum low
is a
NaCl optimum
rdfs:subClassOfNaCl optimum low is a quantitative bin of the NaCl-optimum phenotype.
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DOI:10.1093/femsre/fuy009optimal NaCl
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non-halophilic optimum NaCl (<0.2 M / ~1% w/v)
defined as
NaCl optimum low
Non-halophilic optimum at <0.2 M (~1% w/v) NaCl corresponds to the NaCl-optimum-low trait.
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DOI:10.3389/fmicb.2019.01895
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halotolerant organism
is a
non-halophilic optimum NaCl (<0.2 M / ~1% w/v)
rdfs:subClassOfHalotolerant organisms are non-halophiles (low-NaCl optimum) able to grow at high salt.
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DOI:10.1007/s40201-020-00519-3
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compatible solute accumulation
supports
osmotic stress adaptation
Accumulation of compatible solutes supports adaptation to osmotic stress.
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DOI:10.1128/aem.00619-25
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minimal osmoadaptive load
reduces demand for
compatible solute accumulation
At low ambient NaCl, minimal osmoadaptive load reduces the need for compatible-solute accumulation.
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DOI:10.1128/aem.00619-25
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cyclic di-AMP
inhibits
K+ uptake systems (Trk/Ktr/Kup/KimA)
RO:0002212Cyclic di-AMP binds gating subunits of Trk/Ktr/Kup/KimA and inhibits K+ uptake.
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DOI:10.1128/mmbr.00181-23
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cyclic di-AMP
negatively regulates
OpuA/OpuC compatible-solute transporters
Cyclic di-AMP binds OpuA/OpuC importers and negatively regulates compatible-solute transport.
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DOI:10.1128/mmbr.00181-23
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Provenance
- Source
- METPO (2025-11-25)
- Definition source
- DOI:10.1093/femsre/fuy009
Parent traits (1)
Synonyms (3)
- Halotolerant
- Non-halophile
- NaO_<=1
kg-microbe context
Matched 1 kg-microbe node via direct_metpo.
METPO:1000465[-1.310, -1.240, -3.413, +3.699, …]
Nearest neighbors in embedding space
- environment pH range mid1 0.643
- environment pH range mid2 0.633
- environment pH range mid3 0.624
- environment pH range low 0.613
- environment pH optimum mid1 0.612
- environment temperature range mid1 0.602
- environment NaCl delta low 0.598
- environment temperature range low 0.591
Curation history
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·
SEEDED_FROM_METPO · seed_from_metpo
imported from data/raw/metpo.owl (CLASS)
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CURATED_CAUSAL_GRAPH · claude
Added DOI-backed definition and causal graph linking minimal osmoadaptive load at low ambient NaCl to the non-halophile / halotolerant NaCl-optimum bin.
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·
GROUND_CAUSAL_PREDICATES · claude
Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2000202×1, rdfs:subClassOf×1).
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·
ENRICH_CAUSAL_GRAPH · claude
Added 6 evidence-backed generic edges (7 new nodes) from the deep-research report.
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·
GROUND_CAUSAL_PREDICATES · claude
Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (rdfs:subClassOf×1, RO:0002212×1).
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·
GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (CHEBI:71578×1).