NaCl delta low

METPO:1000479 · CLASS · REVIEWED

A NaCl delta phenotype with a narrow growth-supporting NaCl breadth of at most approximately 1% (w/v), characteristic of stenohaline organisms.

NaCl-delta-low stenohaline breadth

DOI-backed graph linking limited osmoadaptive flexibility to a narrow NaCl growth breadth (≤ ~1% w/v).

NaCl-delta-low stenohaline breadth Interactive directed graph showing evidence-backed causal relationships for NaCl delta low.

Edge evidence

  • limited osmoadaptive flexibility produces NaCl delta low METPO:2000202

    Limited osmoadaptive flexibility yields a narrow NaCl-delta breadth.

    • DOI:10.1093/femsre/fuy009 salinity range Supports limited osmoadaptive flexibility as the basis of stenohaline breadth.
  • NaCl delta low is a NaCl delta rdfs:subClassOf

    NaCl delta low is a quantitative bin of the NaCl-delta phenotype.

    • DOI:10.1093/femsre/fuy009 salinity range Supports a narrow breadth as a value within the NaCl-delta distribution.
  • ectoine biosynthesis capacity supports salt-tolerance breadth

    Ectoine biosynthesis capacity broadens NaCl tolerance; its loss narrows the growth range.

    • DOI:10.1128/aem.01905-23 Wild-type H. elongata synthesizes ectoine as a major osmolyte, whereas ectoine-deficient strains become salt sensitive; supports general role of ectoine pathway in broadening NaCl tolerance.
  • compatible-solute transporters (Opu/ProU) supports limited osmoadaptive flexibility

    Salinity-induced Opu/ProU compatible-solute transporters underlie osmoadaptive flexibility; limited capacity contributes to narrow breadth.

    • DOI:10.1128/aem.00145-24 Proteomics showed salinity-linked increases in compatible-solute transporters (opuAC, proX/proV/proW) supporting osmoadaptation.
  • TrkH potassium uptake system supports salt-tolerance breadth

    TrkH K+ uptake supports intracellular K+ homeostasis enabling salt tolerance; its absence may contribute to narrow breadth.

    • DOI:10.1128/aem.00145-24 TrkH listed among salinity-responsive proteins; simultaneous accumulation of compatible solutes and K+ supports salt adaptation.
  • NhaC-family Na+/H+ antiporter supports salt-tolerance breadth

    NhaC Na+/H+ antiporters support ion homeostasis under salt stress; a candidate breadth-expanding mechanism whose absence may contribute to NaCl delta low.

    • DOI:10.1128/aem.00145-24 Proteomics show strong salinity-linked increases for NhaC-family antiporters (~3.27 and 3.22-fold).
  • intracellular proline accumulation supports salt-tolerance breadth

    Increased intracellular proline as a compatible solute supports growth at higher NaCl, broadening tolerance.

    • DOI:10.1128/aem.01195-24 Engineered proline biosynthesis with blocked catabolism increased intracellular proline and restored growth at 8% NaCl; supports osmolyte role of proline in salt-tolerance breadth.
  • salt-tolerance breadth is a NaCl delta rdfs:subClassOf

    Salt-tolerance breadth is the capacity quantified by the NaCl-delta phenotype.

    • DOI:10.1093/femsre/fuy009 Osmoadaptation review frames salinity tolerance breadth as the basis of the NaCl-delta (stenohaline vs euryhaline) distinction.

Provenance

Source
METPO (2025-11-25)
Definition source
DOI:10.1093/femsre/fuy009

Parent traits (1)

Synonyms (1)

  • Nad_<=1 RELATED_SYNONYM · metpo.owl

kg-microbe context

Matched 1 kg-microbe node via direct_metpo.

  • METPO:1000479 [-3.032, -4.103, -2.404, +1.560, …]

512-dim DeepWalkSkipGramEnsmallen embedding from kg-microbe (2026-04-25).

Nearest neighbors in embedding space

Top-8 cosine-similar METPO traits from the 2026-04-25 deepwalk (512-D).

Curation history

  1. · SEEDED_FROM_METPO · seed_from_metpo

    imported from data/raw/metpo.owl (CLASS)

  2. · CURATED_CAUSAL_GRAPH · claude

    Added DOI-backed definition and causal graph linking limited osmoadaptive flexibility to the stenohaline NaCl-delta bin.

  3. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2000202×1, rdfs:subClassOf×1).

  4. · ENRICH_CAUSAL_GRAPH · claude

    Added 6 evidence-backed generic edges (6 new nodes) from the deep-research report.

  5. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (rdfs:subClassOf×1).