NaCl delta low
METPO:1000479 · CLASS · REVIEWED
A NaCl delta phenotype with a narrow growth-supporting NaCl breadth of at most approximately 1% (w/v), characteristic of stenohaline organisms.
NaCl-delta-low stenohaline breadth
Edge evidence
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limited osmoadaptive flexibility
produces
NaCl delta low
METPO:2000202Limited osmoadaptive flexibility yields a narrow NaCl-delta breadth.
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DOI:10.1093/femsre/fuy009salinity range
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NaCl delta low
is a
NaCl delta
rdfs:subClassOfNaCl delta low is a quantitative bin of the NaCl-delta phenotype.
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DOI:10.1093/femsre/fuy009salinity range
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ectoine biosynthesis capacity
supports
salt-tolerance breadth
Ectoine biosynthesis capacity broadens NaCl tolerance; its loss narrows the growth range.
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DOI:10.1128/aem.01905-23
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compatible-solute transporters (Opu/ProU)
supports
limited osmoadaptive flexibility
Salinity-induced Opu/ProU compatible-solute transporters underlie osmoadaptive flexibility; limited capacity contributes to narrow breadth.
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DOI:10.1128/aem.00145-24
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TrkH potassium uptake system
supports
salt-tolerance breadth
TrkH K+ uptake supports intracellular K+ homeostasis enabling salt tolerance; its absence may contribute to narrow breadth.
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DOI:10.1128/aem.00145-24
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NhaC-family Na+/H+ antiporter
supports
salt-tolerance breadth
NhaC Na+/H+ antiporters support ion homeostasis under salt stress; a candidate breadth-expanding mechanism whose absence may contribute to NaCl delta low.
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DOI:10.1128/aem.00145-24
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intracellular proline accumulation
supports
salt-tolerance breadth
Increased intracellular proline as a compatible solute supports growth at higher NaCl, broadening tolerance.
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DOI:10.1128/aem.01195-24
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salt-tolerance breadth
is a
NaCl delta
rdfs:subClassOfSalt-tolerance breadth is the capacity quantified by the NaCl-delta phenotype.
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DOI:10.1093/femsre/fuy009
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Provenance
- Source
- METPO (2025-11-25)
- Definition source
- DOI:10.1093/femsre/fuy009
Parent traits (1)
Synonyms (1)
- Nad_<=1
kg-microbe context
Matched 1 kg-microbe node via direct_metpo.
METPO:1000479[-3.032, -4.103, -2.404, +1.560, …]
Nearest neighbors in embedding space
- environment NaCl optimum low 0.598
- environment temperature delta mid2 0.524
- environment pH range low 0.522
- environment pH range mid2 0.516
- environment pH range mid1 0.514
- environment temperature range low 0.501
- environment temperature range mid1 0.491
- environment pH range mid3 0.490
Curation history
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·
SEEDED_FROM_METPO · seed_from_metpo
imported from data/raw/metpo.owl (CLASS)
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CURATED_CAUSAL_GRAPH · claude
Added DOI-backed definition and causal graph linking limited osmoadaptive flexibility to the stenohaline NaCl-delta bin.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2000202×1, rdfs:subClassOf×1).
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·
ENRICH_CAUSAL_GRAPH · claude
Added 6 evidence-backed generic edges (6 new nodes) from the deep-research report.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (rdfs:subClassOf×1).