pH delta low
METPO:1000474 · CLASS · REVIEWED
A pH delta phenotype with a growth-supporting pH breadth of approximately 1–2 pH units, characteristic of organisms with limited pH-tolerance breadth.
pH-delta-low limited-breadth pH homeostasis
Edge evidence
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limited pH-homeostasis flexibility
produces
pH delta low
METPO:2000202Limited pH-homeostasis flexibility yields a 1–2 pH-unit pH-delta breadth.
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DOI:10.1038/nrmicro2549pH homeostasis
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pH delta low
is a
pH delta
rdfs:subClassOfpH delta low is a quantitative bin of the pH-delta phenotype.
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DOI:10.1016/j.tim.2007.02.005proton motive force
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external pH stress
challenges
cytoplasmic pH homeostasis
METPO:2007406External pH outside the maintainable cytoplasmic range challenges pH homeostasis.
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DOI:10.1038/nrmicro2549
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proton motive force architecture
determines
pH homeostasis capacity
PMF architecture (Delta-psi and Delta-pH balancing) determines pH homeostasis capacity.
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DOI:10.1038/nrmicro2549
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weak organic acids
perturbs
delta pH / cytoplasmic pH
Weak organic acids cross the membrane and perturb the proton gradient / cytoplasmic pH.
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DOI:10.1038/nrmicro2549
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electrogenic Na+/H+ antiport
supports
alkaline pH homeostasis
Electrogenic Na+/H+ antiport supports cytoplasmic pH homeostasis under alkaline stress.
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DOI:10.1038/nrmicro2549
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F1Fo-ATPase
contributes to
cytoplasmic pH homeostasis
RO:0002326F1Fo-ATPase contributes to cytoplasmic pH homeostasis by expelling or importing H+.
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DOI:10.1038/nrmicro2549
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Provenance
- Source
- METPO (2025-11-25)
- Definition source
- DOI:10.1038/nrmicro2549
Parent traits (1)
Synonyms (1)
- pHd_1_2
kg-microbe context
Matched 1 kg-microbe node via direct_metpo.
METPO:1000474[-1.168, -0.624, -1.427, +0.785, …]
Nearest neighbors in embedding space
- environment pH range mid2 0.653
- environment pH range mid1 0.646
- environment pH range low 0.625
- environment pH optimum mid1 0.614
- environment pH optimum mid2 0.596
- environment temperature range low 0.589
- environment temperature range mid1 0.587
- environment pH range mid3 0.569
Curation history
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·
SEEDED_FROM_METPO · seed_from_metpo
imported from data/raw/metpo.owl (CLASS)
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CURATED_CAUSAL_GRAPH · claude
Added DOI-backed definition and causal graph linking limited pH-homeostasis flexibility to the narrow-breadth pH-delta-low bin.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2000202×1, rdfs:subClassOf×1).
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ENRICH_CAUSAL_GRAPH · claude
Added 5 evidence-backed generic edges (9 new nodes) from the deep-research report.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2007406×1, RO:0002326×1).
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GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (GO:0051453×1).