axially filamented
METPO:1000705 · CLASS · REVIEWED
A motility where the flagellum filament of an organism is located in the periplasm and does not extend past the cell envelope.
Axial filament periplasmic flagella mechanism
Edge evidence
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periplasmic flagella
defines
axially filamented
METPO:2007500Axial filamented motility is defined by flagella located inside the periplasmic space.
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DOI:10.3390/biom10040550flagella are hidden within the periplasmic space
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periplasmic flagella
localized in
periplasmic space
biolink:located_inSpirochete flagella reside inside the cell envelope rather than extending externally.
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DOI:10.1016/j.semcdb.2015.10.015enclose their flagella in the periplasm
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flagellar basal motor
rotates
periplasmic flagella
Basal motors drive periplasmic flagellar rotation.
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DOI:10.3390/biom10040550connects with a basal motor
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torque generation
depends on
flagellar basal motor
RO:0002502Spirochete-specific motor structures generate torque needed for motility.
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DOI:10.1128/mBio.02494-21generation of the high torque necessary
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periplasmic flagella
enables
corkscrew motility
RO:0002327Periplasmic flagella drive cell-body undulation or corkscrew-like movement.
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DOI:10.1016/j.semcdb.2015.10.015long, helical appendages known as flagella to move
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corkscrew motility
realizes
axially filamented
Corkscrew or undulating movement is the observed locomotion phenotype of axial filament systems.
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DOI:10.3390/biom10040550mechanics of spirochete motility
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FlbB periplasmic ring
forms ring around
flagellar rotor
FlbB forms a novel periplasmic ring around the flagellar rotor, a structural scaffold for the spirochete motor.
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DOI:10.1371/journal.ppat.1012812
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FlbB periplasmic ring
recruits
stator complex
The FlbB-based collar scaffold supports recruitment of torque-generating stator complexes around the rotor.
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DOI:10.1371/journal.ppat.1012812
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stator complex
generates
torque generation
biolink:producesIon-powered stator complexes generate the torque that drives periplasmic flagellar rotation.
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DOI:10.1371/journal.ppat.1012812
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periplasmic flagella
contributes to
wavy / flat-wave cell morphology
RO:0002326Periplasmic flagella establish the wavy/flat-wave cell morphology, acting like a cytoskeleton.
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DOI:10.3390/biom10040550
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Provenance
- Source
- METPO (2025-11-25)
- Author
- Luke Wang
- Definition source
- DOI:10.3390/biom10040550
Parent traits (1)
Synonyms (1)
- axial filament
kg-microbe context
Matched 1 kg-microbe node via direct_metpo.
METPO:1000705[-1.207, -3.411, -0.763, +0.835, …]
Nearest neighbors in embedding space
- morphology spiral shaped 0.296
- environment pH range mid2 0.281
- environment pH range mid1 0.267
- upper enzyme 0.257
- upper material entity 0.252
- environment temperature optimum high 0.250
- upper microbe 0.247
- environment pH range high 0.245
Curation history
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·
SEEDED_FROM_METPO · seed_from_metpo
imported from data/raw/metpo.owl (CLASS)
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CURATED_WITH_LITERATURE · codex
Reviewed axially filamented trait and added DOI-backed causal graph for periplasmic flagella, basal motors, torque generation, and spirochete corkscrew motility.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002327×1).
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GROUND_CAUSAL_PREDICATES · claude
Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (biolink:located_in×1, RO:0002502×1).
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GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (GO:0042597×1).
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GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2007500×1).
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ENRICH_CAUSAL_GRAPH · claude
Added 4 evidence-backed generic edges (4 new nodes) from the deep-research report.
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·
GROUND_CAUSAL_PREDICATES · claude
Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (biolink:produces×1, RO:0002326×1).