temperature optimum low

METPO:1000442 · CLASS · REVIEWED

A temperature optimum phenotype with the best-growth ambient temperature between approximately 10 and 22 °C, characteristic of psychrophilic or psychrotolerant physiology.

Temperature-optimum-low psychrotolerant setpoint

DOI-backed graph linking cold-tolerant membrane and enzyme adaptation to a temperature optimum between 10 and 22 °C.

Temperature-optimum-low psychrotolerant setpoint Interactive directed graph showing evidence-backed causal relationships for temperature optimum low.

Edge evidence

  • cool environment engages psychrotolerant adaptation

    Cool environments engage psychrotolerant adaptation programs.

    • DOI:10.1038/sj.embor.7400662 decreased membrane fluidity Supports cool-temperature membrane-stress responses as the basis of cool-range optima.
  • psychrotolerant adaptation produces temperature optimum low METPO:2000202

    Psychrotolerant adaptation yields a 10–22 °C temperature optimum.

    • DOI:10.1146/annurev-micro-091313-103612 more unsaturated fatty acids Supports homoviscous adaptation as the mechanism setting cool-range optima.
  • temperature optimum low is a temperature optimum rdfs:subClassOf

    Temperature optimum low is a quantitative bin of the temperature-optimum phenotype.

    • DOI:10.1038/sj.embor.7400662 growing well at temperatures around the freezing point of water Supports a 10–22 °C optimum as a value within the temperature-optimum distribution.
  • fatty-acyl unsaturation increases membrane fluidity RO:0002213

    Increased fatty-acyl unsaturation fluidizes the membrane.

    • DOI:10.1128/spectrum.03925-23 fluidizing the membrane and reducing bilayer thickness; broadly generalizable homeoviscous adaptation.
  • low temperature induces cold shock proteins

    Low temperature induces cold shock proteins.

    • DOI:10.37256/amtt.5220244537 CSPs induced at high levels during temperature shifts below 20 C.
  • low temperature promotes accumulation of compatible solutes

    Low temperature promotes accumulation of compatible solutes.

    • DOI:10.37256/amtt.5220244537 Compatible solutes listed: glycine, betaine, glycerol, trehalose, sucrose, mannitol, sorbitol.
  • compatible solutes stabilizes protein and membrane stabilization

    Compatible solutes stabilize proteins and membranes and depress freezing point.

    • DOI:10.37256/amtt.5220244537 with functions in freezing-point depression and stabilization.
  • ice-binding/antifreeze proteins inhibits ice crystal growth RO:0002212

    Ice-binding/antifreeze proteins bind ice surfaces and inhibit ice growth/recrystallization.

    • DOI:10.37256/amtt.5220244537 AFGPs play crucial roles in protecting cells by binding to ice crystal surfaces.
  • low temperature increases oxidative stress RO:0002213

    Low temperature increases oxygen solubility and ROS/oxidative stress.

    • DOI:10.37256/amtt.5220244537 Cold causes increased oxygen solubility and ROS.
  • PUFA biosynthesis maintains membrane fluidity

    PUFA biosynthesis maintains membrane fluidity at low temperature.

    • DOI:10.3390/genes14010158 maintain membrane fluidity; broadly generalizable mechanism.

Provenance

Source
METPO (2025-11-25)
Definition source
DOI:10.1038/sj.embor.7400662

Synonyms (3)

  • Psychrophile EXACT_SYNONYM · metpo.owl
  • Psychrotolerant EXACT_SYNONYM · metpo.owl
  • TO_10_to_22 RELATED_SYNONYM · metpo.owl

kg-microbe context

Matched 1 kg-microbe node via direct_metpo.

  • METPO:1000442 [-5.433, -0.515, -1.647, +0.570, …]

512-dim DeepWalkSkipGramEnsmallen embedding from kg-microbe (2026-04-25).

Nearest neighbors in embedding space

Top-8 cosine-similar METPO traits from the 2026-04-25 deepwalk (512-D).

Curation history

  1. · SEEDED_FROM_METPO · seed_from_metpo

    imported from data/raw/metpo.owl (CLASS)

  2. · CURATED_CAUSAL_GRAPH · claude

    Added DOI-backed definition and causal graph linking psychrotolerant adaptation to the temperature-optimum-low bin.

  3. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2000202×1, rdfs:subClassOf×1).

  4. · ENRICH_CAUSAL_GRAPH · claude

    Added 7 evidence-backed generic edges (10 new nodes) from the deep-research report.

  5. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 3 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002213×2, RO:0002212×1).

  6. · GROUND_CAUSAL_NODES · claude

    Grounded 3 causal-node grounding field(s) via mappings/node_grounding.tsv (PATO:0001306×1, METPO:1007505×1, CHEBI:25728×1).