oval shaped

METPO:1000678 · CLASS · REVIEWED

A cell shape characterized by an ellipsoidal morphology with rounded ends, resembling an elongated sphere.

Oval-shape ovococcal peptidoglycan mechanism

Evidence-backed causal sketch linking oval morphology to peripheral and septal peptidoglycan synthesis, PBP2b-associated elongation, MapZ/FtsZ division positioning, and rounded ellipsoidal geometry.

Oval-shape ovococcal peptidoglycan mechanism Interactive directed graph showing evidence-backed causal relationships for oval shaped.

Edge evidence

  • PBP2b enables peripheral peptidoglycan synthesis RO:0002327

    PBP2b supports peripheral peptidoglycan synthesis in ovococcal elongation.

    • DOI:10.1089/mdr.2014.0032 PBP2b of ovococci Supports PBP2b as a key ovococcal elongation factor.
  • MapZ/FtsZ division-positioning system positions septal peptidoglycan synthesis

    MapZ/FtsZ positioning organizes the division-associated wall synthesis zone.

    • DOI:10.1016/j.mib.2016.07.014 relies on the membrane protein MapZ Supports MapZ/FtsZ involvement in S. pneumoniae cell division.
  • peripheral peptidoglycan synthesis combines with septal peptidoglycan synthesis

    Peripheral and septal synthesis together generate the ovococcal growth pattern.

    • DOI:10.1016/j.cub.2021.04.041 dynamics of peptidoglycan assembly Supports nanometer-scale PG synthesis dynamics in ovoid bacteria.
  • septal peptidoglycan synthesis causes ellipsoidal geometry biolink:causes

    Coordinated septal and peripheral synthesis shapes an ellipsoidal cell body.

    • DOI:10.1089/mdr.2014.0032 ovococci that are ellipsoid Supports the ellipsoidal ovococcal morphology endpoint.
  • ellipsoidal geometry manifests as oval shaped METPO:2007400

    Rounded ellipsoidal geometry manifests the oval-shaped trait.

    • DOI:10.1089/mdr.2014.0032 ellipsoid Supports oval shape as an ellipsoidal bacterial morphology.
  • peripheral peptidoglycan synthesis positively influences oval shaped

    Peripheral PG synthesis extends the cell prior to septal synthesis, producing elongated ovoid geometry.

    • DOI:10.1128/spectrum.04750-22 Ovococcal division model: "the cell synthesizes peripheral PG alone for a short time to extend the cell before septal PG synthesis is initiated".
  • MreC positively influences oval shaped

    Loss of mreC yields smaller, more spherical cells, indicating MreC promotes elongated ovoid shape.

    • DOI:10.1038/s41467-023-38904-9 "cells lacking mreC, pbp2B, and rodA appeared smaller and more spherical" - MreC supports ovoid elongation.
  • RodA positively influences oval shaped

    Loss of rodA yields smaller, more spherical cells, indicating RodA promotes elongated ovoid shape.

    • DOI:10.1038/s41467-023-38904-9 "cells lacking mreC, pbp2B, and rodA appeared smaller and more spherical" - RodA supports ovoid elongation.
  • PBP2b positively influences oval shaped

    Loss of pbp2B yields smaller, more spherical cells, indicating PBP2b promotes elongated ovoid shape.

    • DOI:10.1038/s41467-023-38904-9 "cells lacking mreC, pbp2B, and rodA appeared smaller and more spherical" - PBP2b supports ovoid elongation.
  • RodA part of Rod complex (elongasome) peptidoglycan synthesis biolink:part_of

    RodA together with MreC and PBP2b forms the Rod complex driving peripheral elongation PG synthesis.

    • DOI:10.1038/s41467-023-38904-9 mreC, pbp2B, and rodA act together in the elongation machinery whose loss makes cells spherical.
  • MapZ/FtsZ division-positioning system positively regulates correct septum placement / division-site marking

    MapZ/LocZ mark division sites and ensure correct septum placement.

    • DOI:10.1042/bsr20221664 "MapZ and LocZ are reported as proteins that mark division sites and ensure correct septum placement, respectively".

Provenance

Source
METPO (2025-11-25)
Author
Anthea Guo
Definition source
DOI:10.1089/mdr.2014.0032

Parent traits (1)

Synonyms (1)

  • oval-shaped RELATED_SYNONYM · metpo.owl

kg-microbe context

Matched 1 kg-microbe node via direct_metpo.

  • METPO:1000678 [-12.940, -17.188, -48.453, +20.919, …]

512-dim DeepWalkSkipGramEnsmallen embedding from kg-microbe (2026-04-25).

Nearest neighbors in embedding space

Top-8 cosine-similar METPO traits from the 2026-04-25 deepwalk (512-D).

Curation history

  1. · SEEDED_FROM_METPO · seed_from_metpo

    imported from data/raw/metpo.owl (CLASS)

  2. · CURATED_WITH_LITERATURE · codex

    Added DOI-backed definition and causal graph for PBP2b, MapZ/FtsZ, peripheral and septal peptidoglycan synthesis, and oval cell geometry.

  3. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2007400×1).

  4. · RENAME_PREDICATE_LABELS · claude

    Renamed 2 causal-edge predicate label(s) to align with existing groundings: supports → enables ×1; shapes → causes ×1.

  5. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002327×1, biolink:causes×1).

  6. · GROUND_CAUSAL_NODES · claude

    Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (UniProtKB:A0A892RPK7×1).

  7. · ENRICH_CAUSAL_GRAPH · claude

    Added 6 evidence-backed generic edges (4 new nodes) from the deep-research report.

  8. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (biolink:part_of×1).

  9. · GROUND_CAUSAL_NODES · claude

    Grounded 2 causal-node grounding field(s) via mappings/node_grounding.tsv (UniProtKB:A0A1L9R356×1, UniProtKB:A0A0H2X1V4×1).