flask shaped
METPO:1000675 · CLASS · REVIEWED
A cell shape in which an organism has a bulbous body with a narrower neck-like extension at one pole.
Flask-shape asymmetric polar growth
Edge evidence
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unipolar peptidoglycan growth
regulates
polar neck extension
RO:0002211Unipolar PG growth extends one pole into a narrower neck.
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DOI:10.1146/annurev-cellbio-101011-155745polar growth
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polar neck extension
combines with
bulbous body
A narrow polar neck adjoining a wider body yields flask geometry.
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DOI:10.1146/annurev-cellbio-101011-155745cell shape is genetically determined
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bulbous body
manifests as
flask shaped
METPO:2007400The combined neck+body geometry manifests flask morphology.
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DOI:10.1146/annurev-cellbio-101011-155745polar growth
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zonal polar peptidoglycan synthesis
produces
polar envelope outgrowth
METPO:2000202Polarized cell-wall insertion is a general mechanism producing asymmetric bulb-plus-neck outgrowths.
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DOI:10.1371/journal.pbio.1002565
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position of polar PG growth zone
regulates
appendage position and shape
RO:0002211Moving the localized growth zone changes where neck-like extensions form.
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DOI:10.1371/journal.pbio.1002565
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bactofilin-M23 endopeptidase module
regulates
cell wall biosynthesis
RO:0002211Conserved scaffold/hydrolase module promotes local changes in the mode of cell wall biosynthesis underlying complex shapes.
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DOI:10.7554/elife.86577.2
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bactofilin cytoskeleton
regulates
asymmetric compartment growth
RO:0002211Bactofilin scaffold constrains polar compartment growth; its loss causes unconstrained asymmetric outgrowth.
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DOI:10.7554/elife.86577.2
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Provenance
- Source
- METPO (2025-11-25)
- Definition source
- DOI:10.1146/annurev-cellbio-101011-155745
Parent traits (1)
Synonyms (2)
- flask
- flask-shaped
kg-microbe context
Matched 1 kg-microbe node via direct_metpo.
METPO:1000675[-2.136, -1.080, +0.747, -1.495, …]
Nearest neighbors in embedding space
- environment facultatively anaerobic 0.683
- morphology ovoid shaped 0.497
- morphology ellipsoidal 0.466
- morphology diplococcus shaped 0.456
- morphology dumbbell shaped 0.454
- morphology crescent shaped 0.434
- morphology ring shaped 0.421
- environment obligately aerobic 0.396
Curation history
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·
SEEDED_FROM_METPO · seed_from_metpo
imported from data/raw/metpo.owl (CLASS)
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CURATED_CAUSAL_GRAPH · claude
Added DOI-backed definition and causal graph linking unipolar peptidoglycan growth and neck extension to flask-shaped morphology.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2007400×1).
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·
RENAME_PREDICATE_LABELS · claude
Renamed 1 causal-edge predicate label(s) to align with existing groundings: drives → regulates ×1.
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·
GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002211×1).
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·
ENRICH_CAUSAL_GRAPH · claude
Added 4 evidence-backed generic edges (8 new nodes) from the deep-research report.
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·
GROUND_CAUSAL_PREDICATES · claude
Grounded 4 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002211×3, METPO:2000202×1).