extremely halophilic
METPO:1000628 · CLASS · REVIEWED
A halophily preference in which an organism requires very high salt concentrations (typically 15-30% NaCl or higher) for optimal growth and cannot grow at salt concentrations below approximately 12%.
Extreme halophile salt-in and acidic-proteome mechanism
Edge evidence
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hypersaline brine
selects for
extremely halophilic
METPO:2007401Extreme halophiles are adapted to growth in hypersaline brines.
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DOI:10.1093/femsre/fuy009salt concentrations up to NaCl saturation
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salt-in strategy
uses
potassium ion
Extreme haloarchaea often balance osmotic pressure by accumulating intracellular KCl.
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DOI:10.1093/femsre/fuy009KCl accumulating Halobacterium salinarum
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salt-in strategy
enables
extremely halophilic
RO:0002327Maintaining high intracellular salt supports growth at extreme external salinity.
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DOI:10.1038/srep25642Salt-in strategy
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acidic halophilic proteins
enables
extremely halophilic
RO:0002327Acidic proteins remain soluble and functional in high salt.
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DOI:10.1016/j.copbio.2015.05.004negatively charged due to an excess of acidic over basic residues
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salt-in strategy
requires adaptation of
acidic halophilic proteins
Intracellular salt accumulation requires proteins adapted to high ionic strength.
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DOI:10.1016/j.copbio.2015.05.004promote function in low water activity conditions
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hypersaline brine
causes
osmotic stress
biolink:causesHigh external NaCl imposes osmotic stress on the cell.
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DOI:10.1186/s12934-024-02358-5
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osmotic stress
induces
potassium ion
Osmotic stress triggers rapid intracellular K+ uptake/accumulation.
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DOI:10.1186/s12934-024-02358-5
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Na+/H+ antiporter
mediates
sodium efflux
Na+/H+ antiporters drive sodium exclusion from the cytoplasm.
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DOI:10.3390/microorganisms12081738
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acidic halophilic proteins
supports
protein solubility and function in high salt
Surface acidic residues maintain protein solubility and function at high ionic strength.
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DOI:10.3390/microorganisms12081738
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S-layer glycoprotein N-glycosylation
supports
S-layer stability
N-glycosylation stabilizes the haloarchaeal S-layer.
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DOI:10.3390/v15071469
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hypersaline brine
changes
S-layer glycoprotein N-glycosylation
External salinity alters S-layer glycoprotein N-glycosylation pathways.
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DOI:10.3390/v15071469
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Provenance
- Source
- METPO (2025-11-25)
- Author
- Jed Dongjin Kim-Ozaeta
- Definition source
- PMID:11790755
Parent traits (1)
Synonyms (1)
- extreme-halophilic
kg-microbe context
Matched 1 kg-microbe node via direct_metpo.
METPO:1000628[-5.564, -4.889, -1.753, +2.203, …]
Nearest neighbors in embedding space
- environment halophily preference 0.452
- environment euryhaline 0.438
- environment haloalkaliphilic 0.430
- environment stenohaline 0.420
- environment slightly halophilic 0.417
- environment ionizing radiation tolerant 0.319
- environment UV radiation tolerant 0.319
- physiology quorum sensing 0.319
Curation history
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·
SEEDED_FROM_METPO · seed_from_metpo
imported from data/raw/metpo.owl (CLASS)
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·
CURATED_WITH_ORGANISM_EXAMPLE · codex
Added Haloferax volcanii organism example with PMID-backed evidence.
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ADDED_CAUSAL_GRAPH · codex
Added DOI-backed causal graph for extreme halophile salt-in and acidic-proteome adaptation.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002327×2).
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GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2007401×1).
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GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (METPO:1007720×1).
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REMOVE_REDUNDANT_SYNONYM · claude
Removed 1 synonym(s) whose text duplicated the label (seeder redundancy; no information lost).
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ENRICH_CAUSAL_GRAPH · claude
Added 6 evidence-backed generic edges (6 new nodes) from the deep-research report.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (biolink:causes×1).
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·
GROUND_CAUSAL_NODES · claude
Grounded 2 causal-node grounding field(s) via mappings/node_grounding.tsv (GO:0006970×1, UniProtKB:A0A068T423×1).