temperature optimum mid1

METPO:1000443 · CLASS · REVIEWED

A temperature optimum phenotype with the best-growth ambient temperature between approximately 22 and 27 °C, characteristic of mesophilic physiology.

Temperature-optimum-mid1 lower-mesophile setpoint

DOI-backed graph linking modest membrane and enzyme adaptation at moderate ambient temperature to a temperature optimum between 22 and 27 °C.

Temperature-optimum-mid1 lower-mesophile setpoint Interactive directed graph showing evidence-backed causal relationships for temperature optimum mid1.

Edge evidence

  • lower-mesophilic environment engages mesophile membrane and enzyme adaptation

    Lower-mesophilic environments engage moderate adaptation programs.

    • DOI:10.1146/annurev-micro-091313-103612 more unsaturated fatty acids Supports moderate-temperature membrane homeoviscous adaptation.
  • mesophile membrane and enzyme adaptation produces temperature optimum mid1 METPO:2000202

    Mesophile adaptation yields a 22–27 °C optimum.

    • DOI:10.1146/annurev-micro-091313-103612 more unsaturated fatty acids Supports the 22–27 °C optimum as the lower-mesophile outcome.
  • temperature optimum mid1 is a temperature optimum rdfs:subClassOf

    Temperature optimum mid1 is a quantitative bin of the temperature-optimum phenotype.

    • DOI:10.1016/s0300-9629(97)00003-0 adapted to environments of high temperature Supports the 22–27 °C optimum as a value within the temperature-optimum distribution.
  • mesophile membrane and enzyme adaptation increases abundance of unsaturated fatty acids

    Mesophile membrane adaptation increases unsaturated fatty acid content.

    • DOI:10.1007/s42770-023-01057-4 The Des desaturase inserts double bonds in membrane fatty acids, fluidizing the membrane.
  • unsaturated fatty acids increases membrane fluidity RO:0002213

    Unsaturated fatty acids fluidize the membrane.

    • DOI:10.1007/s42770-023-01057-4 Inserting double bonds into membrane fatty acids fluidizes the membrane and reverses the cold signal.
  • membrane fluidity is sensed as input to homeoviscous adaptation

    Membrane physical state/fluidity is the sensed input driving homeoviscous adaptation.

    • DOI:10.1039/d4cc03114h HVA, a universal paradigm; initial step involves membrane stress sensing with membrane fluidity as a proposed sensed parameter.
  • homeoviscous adaptation remodels toward increased low-melting membrane lipids

    Homeoviscous adaptation increases low-melting membrane lipids.

    • DOI:10.1039/d4cc03114h Adaptive changes include increasing low-melting lipids: MUFAs, PUFAs, branched and short-chain fatty acids.
  • branched-chain amino acids serve as precursors for branched-chain fatty acids

    BCAAs are biosynthetic precursors of iso/anteiso branched membrane fatty acids.

    • DOI:10.1007/s42770-023-01057-4 Branched (iso/anteiso) FAs derive from branched-chain amino acid precursors (valine, leucine, isoleucine).
  • branched-chain fatty acids increases membrane fluidity RO:0002213

    Branched-chain (anteiso) fatty acids fluidize the membrane during cold adaptation.

    • DOI:10.1007/s42770-023-01057-4 Membrane fluidization via chain branching is a predominant longer-term cold adaptation mechanism.

Provenance

Source
METPO (2025-11-25)
Definition source
DOI:10.1146/annurev-micro-091313-103612

Synonyms (2)

  • Mesophilie EXACT_SYNONYM · metpo.owl
  • TO_22_to_27 RELATED_SYNONYM · metpo.owl

kg-microbe context

Matched 1 kg-microbe node via direct_metpo.

  • METPO:1000443 [-2.358, -0.748, +0.437, +3.286, …]

512-dim DeepWalkSkipGramEnsmallen embedding from kg-microbe (2026-04-25).

Nearest neighbors in embedding space

Top-8 cosine-similar METPO traits from the 2026-04-25 deepwalk (512-D).

Curation history

  1. · SEEDED_FROM_METPO · seed_from_metpo

    imported from data/raw/metpo.owl (CLASS)

  2. · CURATED_CAUSAL_GRAPH · claude

    Added DOI-backed definition and causal graph linking mesophile membrane and enzyme adaptation to the temperature-optimum-mid1 bin.

  3. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2000202×1, rdfs:subClassOf×1).

  4. · ENRICH_CAUSAL_GRAPH · claude

    Added 6 evidence-backed generic edges (6 new nodes) from the deep-research report.

  5. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002213×2).

  6. · GROUND_CAUSAL_NODES · claude

    Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (METPO:1007505×1).

  7. · GROUND_CAUSAL_NODES · claude

    Grounded 2 causal-node grounding field(s) via mappings/node_grounding.tsv (CHEBI:27208×1, CHEBI:35819×1).