magnetosome

traitmech:000071 · CLASS · REVIEWED

A membrane-bounded intracellular organelle containing a magnetic iron-mineral crystal (magnetite or greigite); chains of magnetosomes allow magnetotactic bacteria to align with and navigate along geomagnetic field lines.

Magnetosome chains enable magnetotactic navigation

Evidence-backed causal sketch linking membrane-bounded magnetic-mineral organelles arranged in chains to alignment with geomagnetic fields and magnetotactic navigation.

Magnetosome chains enable magnetotactic navigation Interactive directed graph showing evidence-backed causal relationships for magnetosome.

Edge evidence

  • magnetic iron-mineral crystal located in magnetosome biolink:located_in

    The magnetic mineral crystal sits inside the magnetosome membrane.

    • DOI:10.1038/nrmicro.2016.99 Uebe & Schüler review magnetosome biogenesis as the formation of membrane-bounded magnetic-mineral organelles.
  • magnetosome enables magnetotaxis RO:0002327

    Chains of magnetosomes act as a cellular compass, aligning the organism with geomagnetic field lines.

    • DOI:10.1038/nrmicro842 Bazylinski & Frankel describe magnetosomes and the magnetotactic lifestyle they enable.
  • MamK organizes magnetosome chain assembly

    The actin-like protein MamK organizes magnetosomes into chains.

    • DOI:10.1128/mbio.01649-23 MTB align their magnetosome organelles into chains, organized by the actin-like MamK; broadly conserved.
  • MamK polymerizes into actin-like MamK filaments

    MamK polymerizes into long actin-like filaments that scaffold the magnetosome chain.

    • DOI:10.1128/mbio.01649-23 MamK polymerizes into long, actin-like filaments.
  • magnetosome chain assembly enables magnetotaxis RO:0002327

    Chain assembly of magnetosomes underlies the cellular compass enabling magnetotaxis.

    • DOI:10.1128/mbio.01649-23 Magnetosomes aligned into chains by MamK form the magnetic compass for navigation.
  • mamAB operon sufficient for magnetosome biomineralization

    The mamAB operon is sufficient for rudimentary magnetosome biomineralization.

    • DOI:10.1111/mmi.15330 The mamAB operon is sufficient for rudimentary biomineralization.
  • magnetosome biomineralization produces magnetic iron-mineral crystal METPO:2000202

    Biomineralization forms the magnetic iron-mineral crystal within the magnetosome.

    • DOI:10.1111/mmi.15330 Magnetosome biomineralization yields the intracellular magnetic mineral crystal.
  • MamB promotes magnetosome membrane invagination RO:0002213

    MamB promotes invagination of the cytoplasmic membrane to form the magnetosome vesicle.

    • DOI:10.1111/mmi.15330 MamB likely recruits MAPs and promotes membrane invagination.
  • oxygen-poor, low-sulfide environment favors magnetite magnetosome

    Oxygen-poor, low-sulfide environments favor magnetite magnetosomes.

    • DOI:10.1111/mmi.15330 Magnetite is more common in oxygen-poor, low-sulfide environments.
  • sulfide-rich habitat favors greigite magnetosome

    Sulfide-rich habitats favor greigite magnetosomes.

    • DOI:10.1111/mmi.15330 Greigite dominates in sulfide-rich habitats.

Provenance

Source
METPO (2025-11-25)
Definition source
DOI:10.1038/nrmicro.2016.99

Synonyms (1)

  • magnetotactic RELATED_SYNONYM · DOI:10.1038/nrmicro842

kg-microbe context

Matched 1 kg-microbe node via parent_proxy.

  • METPO:1000059 [-2.682, -2.070, -3.656, -0.652, …]

512-dim DeepWalkSkipGramEnsmallen embedding from kg-microbe (2026-04-25).

Nearest neighbors in embedding space

Top-8 cosine-similar METPO traits from the 2026-04-25 deepwalk (512-D).

Curation history

  1. · PROPOSED_FROM_RESEARCH · claude

    Proposed candidate MORPHOLOGY trait (magnetosome); organelle sub-variant of intracellular inclusion.

  2. · CURATED_CAUSAL_GRAPH · claude

    Added evidence-backed causal graph (magnetosome / magnetotaxis) with RO/biolink predicate groundings; promoted PROPOSED to REVIEWED.

  3. · ENRICH_CAUSAL_GRAPH · claude

    Added 8 evidence-backed generic edges (11 new nodes) from the deep-research report.

  4. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 3 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002327×1, METPO:2000202×1, RO:0002213×1).

  5. · GROUND_CAUSAL_NODES · claude

    Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (UniProtKB:A0A6J4ZQS8×1).