sphere shaped

METPO:1000683 · CLASS · REVIEWED

A cell shape in which an organism has a spherical or nearly spherical morphology with roughly equal dimensions in all directions.

Spherical shape septal peptidoglycan mechanism

Evidence-backed causal sketch linking spherical cell shape to FtsZ-associated septal synthesis, peptidoglycan remodeling, and limited lateral elongation.

Spherical shape septal peptidoglycan mechanism Interactive directed graph showing evidence-backed causal relationships for sphere shaped.

Edge evidence

  • FtsZ division ring enables septal peptidoglycan synthesis RO:0002327

    The FtsZ division ring organizes septal wall synthesis.

    • DOI:10.1038/nrmicro1205 FtsZ collaborates with penicillin binding proteins Supports FtsZ-PBP cooperation in division-associated shape generation.
  • septal peptidoglycan synthesis builds peptidoglycan cell wall biolink:produces

    Septal synthesis builds and remodels the spherical cell wall.

    • DOI:10.1038/nrmicro3088 synthesize peptidoglycan only at the division septum Supports septal-only PG synthesis in spherical cocci.
  • lateral cell-wall elongation reduced in sphere shaped

    Reduced lateral elongation helps preserve a sphere rather than a rod.

    • DOI:10.1038/nrmicro3088 mechanisms controlling growth and division of coccoid bacteria Broad review supports different growth mechanisms for coccoid versus rod-shaped bacteria.
  • peptidoglycan cell wall regulates sphere shaped RO:0002211

    Peptidoglycan wall geometry maintains the spherical shape.

    • DOI:10.1038/nrmicro1205 primary role in maintaining cell shape Supports the cell wall as central to bacterial shape maintenance.
  • septal peptidoglycan synthesis contributes to sphere shaped RO:0002326

    Septal-only peptidoglycan synthesis in cocci produces spherical morphology.

    • DOI:10.1038/nrmicro3088 spherical cocci synthesize peptidoglycan only at the division septum
  • MreB-mediated elongation machinery causally upstream of elongation capacity

    Loss of the MreB cytoskeleton removes the elongation capacity that lengthens rods.

    • DOI:10.1038/nrmicro3088 loss of the MreB cytoskeleton is the main factor that prevents cocci from elongating into rods
  • elongation capacity reduced in sphere shaped

    Loss of elongation capacity prevents cocci from elongating into rods, favoring a sphere.

    • DOI:10.1038/nrmicro3088 prevents cocci from elongating into rods
  • FtsZ division ring recruits divisome and PBPs

    FtsZ assembly into a mid-cell Z ring recruits PBPs and divisome components.

    • DOI:10.1038/nrmicro3088 cell division is initiated by FtsZ assembly into a mid-cell Z ring that recruits PBPs and divisome components
  • FtsZ treadmilling regulates septal peptidoglycan synthesis RO:0002211

    FtsZ treadmilling distributes the PG synthases that form the septum.

    • DOI:10.1042/bsr20221664 The FtsZ polymers undergo treadmilling around the Z-ring to distribute the PG synthases forming the septum
  • FtsW lipid II flippase enables lipid II RO:0002327

    FtsW flips lipid II to the outer septal face for PG synthesis.

    • DOI:10.1038/nrmicro3088 lipid II is flipped to the outside by the septally localized flippase FtsW
  • lipid II enables septal peptidoglycan synthesis RO:0002327

    Lipid II serves as the PBP substrate for septal peptidoglycan synthesis.

    • DOI:10.1038/nrmicro3088 PG synthesis uses lipid II as the PBP substrate

Provenance

Source
METPO (2025-11-25)
Author
Anthea Guo
Definition source
DOI:10.1038/nrmicro3088

Parent traits (1)

Synonyms (2)

  • S_sphere RELATED_SYNONYM · metpo.owl
  • sphere-shaped RELATED_SYNONYM · metpo.owl

kg-microbe context

Matched 1 kg-microbe node via direct_metpo.

  • METPO:1000683 [-4.221, -1.488, -1.716, +1.200, …]

512-dim DeepWalkSkipGramEnsmallen embedding from kg-microbe (2026-04-25).

Nearest neighbors in embedding space

Top-8 cosine-similar METPO traits from the 2026-04-25 deepwalk (512-D).

Curation history

  1. · SEEDED_FROM_METPO · seed_from_metpo

    imported from data/raw/metpo.owl (CLASS)

  2. · CURATED_WITH_LITERATURE · codex

    Added DOI-backed definition and causal graph for FtsZ-associated septal peptidoglycan synthesis, peptidoglycan cell wall, reduced lateral elongation, and spherical morphology.

  3. · RENAME_PREDICATE_LABELS · claude

    Renamed 1 causal-edge predicate label(s) to align with existing groundings: maintains → regulates ×1.

  4. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002211×1).

  5. · RENAME_PREDICATE_LABELS · claude

    Renamed 1 causal-edge predicate label(s) to align with existing groundings: organizes → enables ×1.

  6. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002327×1).

  7. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (biolink:produces×1).

  8. · ENRICH_CAUSAL_GRAPH · claude

    Added 7 evidence-backed generic edges (6 new nodes) from the deep-research report.

  9. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 4 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002327×2, RO:0002326×1, RO:0002211×1).

  10. · GROUND_CAUSAL_NODES · claude

    Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (CHEBI:27692×1).