oxidase activity
traitmech:000076 · CLASS · REVIEWED
A physiological enzyme-activity phenotype in which a cell produces a terminal respiratory oxidase (notably cytochrome c oxidase); it is the basis of the diagnostic oxidase test.
Terminal respiratory oxidase reducing oxygen
Edge evidence
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cytochrome c oxidase
enables
cytochrome-c oxidase activity
RO:0002327Cytochrome c oxidase carries out terminal oxidase activity.
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DOI:10.3390/microorganisms10050926
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cytochrome-c oxidase activity
consumes
molecular oxygen
biolink:consumesThe terminal oxidase reduces molecular oxygen to water.
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DOI:10.1089/ars.2020.8039
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cytochrome c oxidase
enables
oxidase activity
RO:0002327Possession of a terminal oxidase confers the oxidase-activity phenotype.
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DOI:10.3390/microorganisms10050926
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reduced cytochrome c
donates electrons to
CuA center
METPO:2007403Reduced cytochrome c donates electrons to the CuA center of subunit II.
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DOI:10.3390/microorganisms10050926
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CuA center
transfers electrons to
heme a
METPO:2007403The CuA center relays electrons to low-spin heme a.
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DOI:10.3390/microorganisms10050926
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heme a3-CuB binuclear center
reduces
molecular oxygen
METPO:2000017The heme a3-CuB binuclear center reduces molecular oxygen to water.
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DOI:10.3390/microorganisms10050926
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family A cytochrome c oxidase
has cofactor
heme a
Family A cytochrome c oxidase contains two heme A prosthetic groups (heme a and heme a3).
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DOI:10.3390/microorganisms10050926
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family A cytochrome c oxidase
has cofactor
CuA/CuB copper centers
Family A cytochrome c oxidase carries three copper atoms in CuA and CuB centers.
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DOI:10.3390/microorganisms10050926
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carbon monoxide
inhibits
cytochrome-c oxidase activity
RO:0002212Carbon monoxide is a potent inhibitor of heme-copper cytochrome c oxidase activity.
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DOI:10.3390/ijms26062809
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Provenance
- Source
- METPO (2025-11-25)
- Definition source
- DOI:10.3390/microorganisms10050926
Parent traits (1)
Synonyms (1)
- oxidase-positive
kg-microbe context
Matched 1 kg-microbe node via parent_proxy.
METPO:1000059[-2.682, -2.070, -3.656, -0.652, …]
Nearest neighbors in embedding space
- environment cadmium tolerant 1.000
- morphology sulfur globule 1.000
- environment cobalt tolerant 1.000
- environment copper tolerant 1.000
- environment desiccation tolerant 1.000
- environment piezophilic 1.000
- environment obligately piezophilic 1.000
- morphology gas vesicle 1.000
Curation history
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PROPOSED_FROM_RESEARCH · claude
Proposed candidate PHYSIOLOGY trait (oxidase activity) from literature research to fill the enzyme-activity-phenotype gap.
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CURATED_CAUSAL_GRAPH · claude
Added evidence-backed causal graph (terminal oxidase reducing O2) with GO/CHEBI node groundings and RO/biolink predicate groundings; promoted PROPOSED to REVIEWED.
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GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (UniProtKB:A0A075NZN5×1).
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ENRICH_CAUSAL_GRAPH · claude
Added 6 evidence-backed generic edges (7 new nodes) from the deep-research report.
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GROUND_CAUSAL_PREDICATES · claude
Grounded 4 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2007403×2, METPO:2000017×1, RO:0002212×1).
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GROUND_CAUSAL_NODES · claude
Grounded 1 causal-node grounding field(s) via mappings/node_grounding.tsv (CHEBI:17245×1).
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GROUND_CAUSAL_NODES · claude
Grounded 2 causal-node grounding field(s) via mappings/node_grounding.tsv (CHEBI:16928×1, CHEBI:24479×1).