filament shaped
METPO:1000674 · CLASS · REVIEWED
A cell shape in which an organism grows as elongated filamentous cells or hypha-like structures.
Filament-shape Streptomyces polar growth mechanism
Edge evidence
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DivIVA
localizes to
apical polarisome
biolink:located_inDivIVA localizes at hyphal tips as part of the polar growth machinery.
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DOI:10.1016/j.mib.2010.10.002polarity determinant DivIVA
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Scy
enables
apical polarisome
RO:0002327Scy is a component of the tip-organizing center controlling polar growth.
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DOI:10.1371/journal.pgen.1002423tip organizing center
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apical polarisome
recruits
apical peptidoglycan synthesis
The apical polarisome recruits cell-wall synthesis machinery to hyphal tips.
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DOI:10.1016/j.mib.2012.10.012polarisome-like complex involving the essential polarity protein DivIVA
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apical peptidoglycan synthesis
regulates
hyphal tip extension
RO:0002211Localized wall synthesis at the tip drives filament extension.
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DOI:10.1038/s41564-025-02080-xDivIVA drives growth at the hyphal poles
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hyphal tip extension
manifests as
filament shaped
METPO:2007400Hyphal tip extension manifests filamentous morphology.
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DOI:10.1016/j.mib.2010.10.002Streptomyces hyphae
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RecA/LexA SOS response
induces
SulA
DNA damage activates the RecA/LexA SOS response, inducing the division inhibitor SulA.
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DOI:10.1002/advs.202203260
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SulA
inhibits
FtsZ polymerization
RO:0002212SulA blocks FtsZ polymerization, preventing Z-ring assembly and septation.
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DOI:10.1002/advs.202203260
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FtsZ polymerization
regulates
filament shaped
RO:0002211Inhibited FtsZ polymerization blocks septation, causing non-septate filamentation.
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DOI:10.1002/advs.202203260
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apical polarisome
enables
polar hyphal growth
RO:0002327The DivIVA/polarisome assembly mediates polar growth at hyphal tips.
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DOI:10.1128/jb.00153-23
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apical polarisome
promotes
hyphal branch emergence
RO:0002213Splitting of polarisomes at tips produces daughter polarisomes that coordinate new branch emergence.
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DOI:10.1093/femsml/uqad020
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CglA
enables
cell-wall glycopolymer attachment
RO:0002327CglA is the glycopolymer ligase mediating attachment of glycopolymers to the cell wall.
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DOI:10.1128/mbio.01492-24
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cell-wall glycopolymer attachment
regulates
filament shaped
RO:0002211Reduced glycopolymer attachment results in enlarged vegetative hyphae and loss of hyphal cell shape.
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DOI:10.1128/mbio.01492-24
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Provenance
- Source
- METPO (2025-11-25)
- Author
- Luke Wang
- Definition source
- DOI:10.1016/j.mib.2010.10.002
Parent traits (1)
Synonyms (3)
- S_filament
- filament
- filament-shaped
kg-microbe context
Matched 1 kg-microbe node via direct_metpo.
METPO:1000674[+1.704, -8.992, +4.797, -2.737, …]
Nearest neighbors in embedding space
- morphology fusiform shaped 0.384
- morphology branched shaped 0.361
- morphology tailed shaped 0.324
- morphology spore forming 0.313
- morphology sporulation 0.292
- environment non halophilic 0.275
- morphology disc shaped 0.263
- morphology spore shaped 0.251
Curation history
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·
SEEDED_FROM_METPO · seed_from_metpo
imported from data/raw/metpo.owl (CLASS)
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CURATED_WITH_LITERATURE · codex
Added DOI-backed definition and causal graph for DivIVA, Scy, apical polarisome, apical peptidoglycan synthesis, and hyphal tip extension.
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·
GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (biolink:located_in×1).
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·
GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2007400×1).
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·
RENAME_PREDICATE_LABELS · claude
Renamed 1 causal-edge predicate label(s) to align with existing groundings: drives → regulates ×1.
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·
GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002211×1).
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·
GROUND_CAUSAL_NODES · claude
Grounded 2 causal-node grounding field(s) via mappings/node_grounding.tsv (UniProtKB:Q1IYG2×1, UniProtKB:A0A191V3Q4×1).
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·
RENAME_PREDICATE_LABELS · claude
Renamed 1 causal-edge predicate label(s) to align with existing groundings: organizes → enables ×1.
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·
GROUND_CAUSAL_PREDICATES · claude
Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002327×1).
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·
ENRICH_CAUSAL_GRAPH · claude
Added 7 evidence-backed generic edges (7 new nodes) from the deep-research report.
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·
GROUND_CAUSAL_PREDICATES · claude
Grounded 6 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002211×2, RO:0002327×2, RO:0002212×1, RO:0002213×1).
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·
GROUND_CAUSAL_NODES · claude
Grounded 2 causal-node grounding field(s) via mappings/node_grounding.tsv (UniProtKB:H8YHZ0×1, UniProtKB:A0A0C1K447×1).