non-spore forming

METPO:1000872 · CLASS · REVIEWED

A sporulation in which an organism lacks the ability to produce endospores.

Non-spore-forming absent Spo0A cascade

DOI-backed graph linking absence or non-functionality of the Spo0A-initiated sporulation regulatory cascade to inability to form endospores.

Non-spore-forming absent Spo0A cascade Interactive directed graph showing evidence-backed causal relationships for non-spore forming.

Edge evidence

  • absent Spo0A regulatory cascade prevents no asymmetric septation RO:0002212

    Without the Spo0A/sigma cascade, asymmetric septation cannot be initiated.

    • DOI:10.1146/annurev.genet.30.1.297 activation of these sigma factors to landmark events in morphogenesis Supports the Spo0A/sigma cascade as the gatekeeper of sporulation morphogenesis.
  • no asymmetric septation prevents no endospore formation RO:0002212

    Without asymmetric septation, the forespore compartment and subsequent endospore cannot be produced.

    • DOI:10.1146/annurev.genet.30.1.297 activation of these sigma factors to landmark events in morphogenesis Supports asymmetric septation as a required step for endospore formation.
  • no endospore formation manifests as non-spore forming METPO:2007400

    Failure to produce endospores manifests the non-spore-forming trait.

    • DOI:10.1155/2013/898106 S. aureus does not form spores Supports the trait endpoint in a representative organism.
  • absence of spo0A gene predicts non-spore forming

    Absence of spo0A is an excellent predictor of inability to sporulate.

    • DOI:10.1128/jb.00079-22 Comparative genomics of 180 genomes: spo0A present in all 76 sporeformers; its absence predicts non-sporulation.
  • loss of sporulation genes causes non-spore forming biolink:causes

    Loss of a considerable fraction of sporulation genes yields an asporogenic phenotype.

    • DOI:10.1111/1462-2920.16145 Asporogenic phenotypes can result from inactivation or loss of a considerable fraction of sporulation genes (generic edge).
  • low or absent Spo0A activity causes loss of sporulation capacity biolink:causes

    Low or absent Spo0A activity abolishes sporulation capacity.

    • DOI:10.3389/fmicb.2021.630573 Spo0A is the master regulator of endospore formation; elevated Spo0A~P is required to trigger sporulation.
  • loss of sporulation capacity manifests as non-spore forming METPO:2007400

    Loss of sporulation capacity manifests the non-spore-forming phenotype.

    • DOI:10.3389/fmicb.2021.630573 Failure to produce/activate Spo0A prevents sporulation, yielding the non-spore-forming trait.
  • Rap phosphatases dephosphorylates dephosphorylation of Spo0F

    Rap phosphatases directly dephosphorylate Spo0F.

    • DOI:10.1038/s41522-024-00594-6 Rap phosphatases directly dephosphorylate Spo0F (generic to Bacillus phosphorelay logic).
  • dephosphorylation of Spo0F decreases activation of low or absent Spo0A activity

    Dephosphorylation of Spo0F reduces phosphate flow to Spo0A, decreasing its activation.

    • DOI:10.1038/s41522-024-00594-6 Reduced phosphate flow to Spo0A in the sporulation phosphorelay (corroborated by DOI:10.3390/microorganisms11081928).
  • Spo0A phosphorelay disruption prevents no entry into sporulation RO:0002212

    Disruption of the KinA/KinB -> Spo0F -> Spo0B -> Spo0A phosphorelay arrests entry into sporulation.

    • DOI:10.3390/microorganisms11081928 The phosphorelay signals the start of sporulation; mutants arrest at stages 0/I when initiation fails.
  • no entry into sporulation manifests as non-spore forming METPO:2007400

    Failure to enter sporulation manifests the non-spore-forming phenotype.

    • DOI:10.3390/microorganisms11081928 Arrest at sporulation initiation produces the non-spore-forming endpoint.

Provenance

Source
METPO (2025-11-25)
Definition source
DOI:10.1155/2013/898106

Parent traits (1)

Synonyms (2)

  • no RELATED_SYNONYM · metpo.owl
  • no_spore RELATED_SYNONYM · metpo.owl

kg-microbe context

Matched 1 kg-microbe node via direct_metpo.

  • METPO:1000872 [+88.853, -240.826, -35.218, -139.525, …]

512-dim DeepWalkSkipGramEnsmallen embedding from kg-microbe (2026-04-25).

Nearest neighbors in embedding space

Top-8 cosine-similar METPO traits from the 2026-04-25 deepwalk (512-D).

Curation history

  1. · SEEDED_FROM_METPO · seed_from_metpo

    imported from data/raw/metpo.owl (CLASS)

  2. · CURATED_WITH_ORGANISM_EXAMPLE · codex

    Added Staphylococcus aureus organism example with DOI-backed evidence.

  3. · CURATED_CAUSAL_GRAPH · claude

    Added DOI-backed causal graph linking absence of Spo0A regulatory cascade and asymmetric septation to the non-spore-forming phenotype.

  4. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 1 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (METPO:2007400×1).

  5. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 2 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (RO:0002212×2).

  6. · ENRICH_CAUSAL_GRAPH · claude

    Added 8 evidence-backed generic edges (8 new nodes) from the deep-research report.

  7. · GROUND_CAUSAL_PREDICATES · claude

    Grounded 5 causal-edge predicate_id field(s) via mappings/predicate_grounding.tsv (biolink:causes×2, METPO:2007400×2, RO:0002212×1).